| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcDH1_3649 |
|---|
| Symbol | |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli DH1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | CP001637 |
|---|
| Strand | + |
|---|
| Start bp | 3931567 |
|---|
| End bp | 3932961 |
|---|
| Gene Length | 1395 bp |
|---|
| Protein Length | 464 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | |
|---|
| Product | restriction modification system DNA specificity domain protein |
|---|
| Protein accession | ACX41261 |
|---|
| Protein GI | 260450839 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 44 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGCGG GGAAATTGCC GGAGGGGTGG GTTATCGCCC CAGTATCTAC GGTCACAACT
CTAATCCGAG GAGTAACGTA TAAAAAAGAG CAGGCAATAA ATTATCTAAA AGATGATTAT
TTGCCTCTTA TCCGTGCGAA CAATATTCAG AATGGCAAGT TTGATACTAC GGACTTGGTT
TTTGTTCCTA AAAATCTTGT TAAAGAAAGT CAAAAAATAT CTCCTGAAGA TATTGTTATT
GCAATGTCAT CAGGGAGCAA ATCCGTAGTT GGTAAATCCG CACATCAGCA TCTACCATTT
GAATGTAGTT TCGGCGCATT TTGCGGTGTA TTACGTCCTG AAAAACTTAT ATTTTCTGGT
TTTATTGCTC ATTTCACAAA ATCTTCTCTT TATCGAAACA AAATTTCATC ACTTTCTGCT
GGTGCAAATA TTAATAATAT TAAGCCGGCA AGCTTTGATT TGATAAATAT ACCAATCCCA
CCACTTGCCG AACAAAAAAT CATCGCTGAA AAACTCGATA CGCTGCTGGC GCAGGTAGAC
AGCACCAAAG CACGTTTTGA GCAAATCCCA CAAATCCTGA AACGTTTTCG TCAAGCGGTA
TTGGGGGGCG CAGTTAATGG AAAATTGACA GAAAAATGGC GTAATTTTGA GCCGCAACAT
TCTGTATTTA AGAAGTTAAA TTTTGAATCT ATCTTAACTG AATTACGTAA TGGTCTTTCA
TCAAAGCCAA ATGAAAGTGG TGTTGGTCAT CCAATACTAC GCATTAGTTC TGTACGTGCT
GGCCATGTAG ATCAAAACGA TATTCGGTTT CTAGAATGTT CAGAAAGTGA ACTAAACCGC
CACAAATTAC AAGATGGAGA TCTTTTATTT ACTCGCTATA ACGGAAGTTT AGAATTTGTT
GGTGTTTGTG GGTTATTGAA AAAATTACAA CATCAAAATT TGCTATATCC TGATAAACTT
ATTCGAGCTC GATTAACCAA AGATGCTTTA CCAGAATATA TCGAAATATT TTTTTCATCC
CCCTCAGCAC GAAATGCAAT GATGAACTGC GTGAAAACAA CTTCTGGTCA AAAAGGTATT
TCAGGAAAAG ATATCAAATC CCAAGTTGTT TTATTACCTC CAGTAAAAGA ACAAGCCGAA
ATCGTTCGCC GCGTCGAGCA ACTCTTCGCC TACGCCGACA CCATAGAAAA ACAGGTCAAC
AACGCCTTAG CCCGCGTCAA CAACCTGACG CAATCCATCC TGGCAAAAGC GTTCCGTGGT
GAACTTACCG CCCAGTGGCG GGCCGAAAAC CCGGATTTGA TCAGCGGAGA AAACAGCGCC
GCCGCGTTGC TGGAAAAAAT CAAAGCTGAA CGCGCAGCTA GCGGGGGTAA AAAAGCCTCA
CGTAAAAAAT CCTGA
|
|---|
| Protein sequence | MSAGKLPEGW VIAPVSTVTT LIRGVTYKKE QAINYLKDDY LPLIRANNIQ NGKFDTTDLV
FVPKNLVKES QKISPEDIVI AMSSGSKSVV GKSAHQHLPF ECSFGAFCGV LRPEKLIFSG
FIAHFTKSSL YRNKISSLSA GANINNIKPA SFDLINIPIP PLAEQKIIAE KLDTLLAQVD
STKARFEQIP QILKRFRQAV LGGAVNGKLT EKWRNFEPQH SVFKKLNFES ILTELRNGLS
SKPNESGVGH PILRISSVRA GHVDQNDIRF LECSESELNR HKLQDGDLLF TRYNGSLEFV
GVCGLLKKLQ HQNLLYPDKL IRARLTKDAL PEYIEIFFSS PSARNAMMNC VKTTSGQKGI
SGKDIKSQVV LLPPVKEQAE IVRRVEQLFA YADTIEKQVN NALARVNNLT QSILAKAFRG
ELTAQWRAEN PDLISGENSA AALLEKIKAE RAASGGKKAS RKKS
|
|---|
| |