Gene Pnuc_1132 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1132 
Symbol 
ID5052600 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand
Start bp1178188 
End bp1179858 
Gene Length1671 bp 
Protein Length556 aa 
Translation table11 
GC content39% 
IMG OID640471302 
Productrestriction modification system DNA specificity subunit 
Protein accessionYP_001155912 
Protein GI145589315 
COG category[V] Defense mechanisms 
COG ID[COG0732] Restriction endonuclease S subunits 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.817215 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTGTTG ATTCTTTTGA CTTGTGGAGT ACATCCATGT CGGAGAGAGC CTCTACTCGT 
GGCAGGAGTT CAGCAAATTC CGGTAATATT TATGGCGTCC AGAAACTGAG AGAATTAATT
CTTCAATTGG CTGTTAGCGG GAGATTAACA ACTGCTGCGA ATAGTTTGCG ATCCGCCAAT
GAAAATCTAT CAGATCAATC TAAGGCCGAA CCATTTATTG TCCCTAGCGG TTGGGTTTGG
AAGTCTTTAA GAGAGGTTGG GCGTGTAAGT ACTGGGAAAA CTCCAGACAC TAGAAATAGT
AATTTCTATA TTGGCACAAC CCCATTTATC GGACCTGGCC AATTAAGCAT GAATCATCGG
ATTCTAAAGT CGGATAAGTT TATTTCAAAA GAGGCTGAAT TAAATACCTC AATTGCACTA
CCAGGAAGCA TTTTAATGGT TTGTATAGGT GGGTCAATTG GTAAGTCGGC AATAGCTACC
CATAGAGTTG CCTTCAATCA ACAAATTAAT GCAATTCAAA CTACAGACTG CAATGTAGAG
TTTATCCACA TGTGCTTAAG GGCAAAGTTT TTTCTGGAGA GAGTTCACCA GCTTTCTTCT
GGATCTGCTA CTCCAATCAT TAATAAATCT AGATGGGAAA ACATACAGAT TCCAATTCCA
CCAATTGGTC AGCAAAATAA AATAGTAGAA AAAGTTAATG CGTTGATGCA ACTATGTGAT
CAGCTTGAGA GGGATGCGCT TAAAAAGGAA ATATTCCACG ATAACTTAGT TATTCATTTT
ATGAGCCTTC TTCTCAGGGC TGAGAGTATC GGGTCATTTC AAGATAATTG GAGCGAGGTG
TCTCAACTTT TTGATGAGCT ATTTATATCA GAACAAAACA TCAATTATCT GAGGGGAATT
ATTATTGATC TTGCTCTCGA GGGTAAGATT TCTCTACAGG ATTCTAGTAA AGACACTCTA
GTAGATTTTC TTGAGTTATG TCGTAAAAAT GCATGTCATT CATCAACCAA GAGGGGTAGG
AAATTAAATA ATGCATCCGA TTTTCAGTCG GATAAAAAAG GTCTACATCA GATCCCGGAG
AGTTGGTCCT GGATTAGATT ATCCGAATTA GCCTCCTTTG AAAATGGCGA TAGAAGTAAA
AATTATCCGT CGCGCGATCA ATTTGTAGCG GCTGGAATGG CATTTATTAA TGCAGGCCAT
CTTCAAGAAG AGGGAATTGA TTATTCAAAT ATGAATTTCA TAGATGTAGA AACGTATGAC
AATCTTAGAT CAGGAAAGAT CAAAGAGGGG GATATATTGT TTTGTCTTAG GGGTTCTCTT
GGAAAATTTG CCATAGTCAA GAATGGTGAA ACTGGAGCAA TAGCATCTTC ATTGGTAATT
ATTCGCCCTT TTGCGCCAGA GATTGTTGAC TATCTTGGAA TTTATTTTTC TTCAACTCTC
GCTAAGGATC AAATTTTAAA GTTTGACAAC GGTACTGCTC AGCCTAATTT AGCGGGAGCC
GATCTTGGCC ATTTTCAAGT TCCTCTTCCC CCGCTGAGTG AGCAAAAAGC TATAGTAGCA
AGTCTAAAAA GATTGCTAGC TTTATGTGAT CAGCTTAGTG AGAGTTTTTC AAAAGCCAGG
CAATTAGAAT GTATGCTGGC CGACTCTTTT GTTGATCAAG CGCTATCCTA G
 
Protein sequence
MLVDSFDLWS TSMSERASTR GRSSANSGNI YGVQKLRELI LQLAVSGRLT TAANSLRSAN 
ENLSDQSKAE PFIVPSGWVW KSLREVGRVS TGKTPDTRNS NFYIGTTPFI GPGQLSMNHR
ILKSDKFISK EAELNTSIAL PGSILMVCIG GSIGKSAIAT HRVAFNQQIN AIQTTDCNVE
FIHMCLRAKF FLERVHQLSS GSATPIINKS RWENIQIPIP PIGQQNKIVE KVNALMQLCD
QLERDALKKE IFHDNLVIHF MSLLLRAESI GSFQDNWSEV SQLFDELFIS EQNINYLRGI
IIDLALEGKI SLQDSSKDTL VDFLELCRKN ACHSSTKRGR KLNNASDFQS DKKGLHQIPE
SWSWIRLSEL ASFENGDRSK NYPSRDQFVA AGMAFINAGH LQEEGIDYSN MNFIDVETYD
NLRSGKIKEG DILFCLRGSL GKFAIVKNGE TGAIASSLVI IRPFAPEIVD YLGIYFSSTL
AKDQILKFDN GTAQPNLAGA DLGHFQVPLP PLSEQKAIVA SLKRLLALCD QLSESFSKAR
QLECMLADSF VDQALS