| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1132 |
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| Symbol | |
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| ID | 5052600 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 1178188 |
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| End bp | 1179858 |
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| Gene Length | 1671 bp |
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| Protein Length | 556 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 640471302 |
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| Product | restriction modification system DNA specificity subunit |
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| Protein accession | YP_001155912 |
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| Protein GI | 145589315 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0732] Restriction endonuclease S subunits |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.817215 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTGTTG ATTCTTTTGA CTTGTGGAGT ACATCCATGT CGGAGAGAGC CTCTACTCGT
GGCAGGAGTT CAGCAAATTC CGGTAATATT TATGGCGTCC AGAAACTGAG AGAATTAATT
CTTCAATTGG CTGTTAGCGG GAGATTAACA ACTGCTGCGA ATAGTTTGCG ATCCGCCAAT
GAAAATCTAT CAGATCAATC TAAGGCCGAA CCATTTATTG TCCCTAGCGG TTGGGTTTGG
AAGTCTTTAA GAGAGGTTGG GCGTGTAAGT ACTGGGAAAA CTCCAGACAC TAGAAATAGT
AATTTCTATA TTGGCACAAC CCCATTTATC GGACCTGGCC AATTAAGCAT GAATCATCGG
ATTCTAAAGT CGGATAAGTT TATTTCAAAA GAGGCTGAAT TAAATACCTC AATTGCACTA
CCAGGAAGCA TTTTAATGGT TTGTATAGGT GGGTCAATTG GTAAGTCGGC AATAGCTACC
CATAGAGTTG CCTTCAATCA ACAAATTAAT GCAATTCAAA CTACAGACTG CAATGTAGAG
TTTATCCACA TGTGCTTAAG GGCAAAGTTT TTTCTGGAGA GAGTTCACCA GCTTTCTTCT
GGATCTGCTA CTCCAATCAT TAATAAATCT AGATGGGAAA ACATACAGAT TCCAATTCCA
CCAATTGGTC AGCAAAATAA AATAGTAGAA AAAGTTAATG CGTTGATGCA ACTATGTGAT
CAGCTTGAGA GGGATGCGCT TAAAAAGGAA ATATTCCACG ATAACTTAGT TATTCATTTT
ATGAGCCTTC TTCTCAGGGC TGAGAGTATC GGGTCATTTC AAGATAATTG GAGCGAGGTG
TCTCAACTTT TTGATGAGCT ATTTATATCA GAACAAAACA TCAATTATCT GAGGGGAATT
ATTATTGATC TTGCTCTCGA GGGTAAGATT TCTCTACAGG ATTCTAGTAA AGACACTCTA
GTAGATTTTC TTGAGTTATG TCGTAAAAAT GCATGTCATT CATCAACCAA GAGGGGTAGG
AAATTAAATA ATGCATCCGA TTTTCAGTCG GATAAAAAAG GTCTACATCA GATCCCGGAG
AGTTGGTCCT GGATTAGATT ATCCGAATTA GCCTCCTTTG AAAATGGCGA TAGAAGTAAA
AATTATCCGT CGCGCGATCA ATTTGTAGCG GCTGGAATGG CATTTATTAA TGCAGGCCAT
CTTCAAGAAG AGGGAATTGA TTATTCAAAT ATGAATTTCA TAGATGTAGA AACGTATGAC
AATCTTAGAT CAGGAAAGAT CAAAGAGGGG GATATATTGT TTTGTCTTAG GGGTTCTCTT
GGAAAATTTG CCATAGTCAA GAATGGTGAA ACTGGAGCAA TAGCATCTTC ATTGGTAATT
ATTCGCCCTT TTGCGCCAGA GATTGTTGAC TATCTTGGAA TTTATTTTTC TTCAACTCTC
GCTAAGGATC AAATTTTAAA GTTTGACAAC GGTACTGCTC AGCCTAATTT AGCGGGAGCC
GATCTTGGCC ATTTTCAAGT TCCTCTTCCC CCGCTGAGTG AGCAAAAAGC TATAGTAGCA
AGTCTAAAAA GATTGCTAGC TTTATGTGAT CAGCTTAGTG AGAGTTTTTC AAAAGCCAGG
CAATTAGAAT GTATGCTGGC CGACTCTTTT GTTGATCAAG CGCTATCCTA G
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| Protein sequence | MLVDSFDLWS TSMSERASTR GRSSANSGNI YGVQKLRELI LQLAVSGRLT TAANSLRSAN
ENLSDQSKAE PFIVPSGWVW KSLREVGRVS TGKTPDTRNS NFYIGTTPFI GPGQLSMNHR
ILKSDKFISK EAELNTSIAL PGSILMVCIG GSIGKSAIAT HRVAFNQQIN AIQTTDCNVE
FIHMCLRAKF FLERVHQLSS GSATPIINKS RWENIQIPIP PIGQQNKIVE KVNALMQLCD
QLERDALKKE IFHDNLVIHF MSLLLRAESI GSFQDNWSEV SQLFDELFIS EQNINYLRGI
IIDLALEGKI SLQDSSKDTL VDFLELCRKN ACHSSTKRGR KLNNASDFQS DKKGLHQIPE
SWSWIRLSEL ASFENGDRSK NYPSRDQFVA AGMAFINAGH LQEEGIDYSN MNFIDVETYD
NLRSGKIKEG DILFCLRGSL GKFAIVKNGE TGAIASSLVI IRPFAPEIVD YLGIYFSSTL
AKDQILKFDN GTAQPNLAGA DLGHFQVPLP PLSEQKAIVA SLKRLLALCD QLSESFSKAR
QLECMLADSF VDQALS
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