165 homologs were found in PanDaTox collection
for query gene Sros_7555 on replicon NC_013595
Organism: Streptosporangium roseum DSM 43021



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013595  Sros_7555  Restriction endonuclease S subunits-like protein  100 
 
 
402 aa  815    Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_009438  Sputcn32_2909  restriction modification system DNA specificity subunit  29.48 
 
 
440 aa  192  8e-48  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_007948  Bpro_1941  restriction endonuclease S subunits-like  34.07 
 
 
451 aa  186  8e-46  Polaromonas sp. JS666  Bacteria  normal  0.0182546  normal  0.0682578 
 
 
-
 
NC_013235  Namu_1103  restriction modification system DNA specificity domain protein  32.02 
 
 
400 aa  171  3e-41  Nakamurella multipartita DSM 44233  Bacteria  normal  0.0442932  normal 
 
 
-
 
NC_014165  Tbis_2508  restriction modification system DNA specificity domain-containing protein  30.31 
 
 
401 aa  142  9.999999999999999e-33  Thermobispora bispora DSM 43833  Bacteria  normal  0.39699  normal  0.700746 
 
 
-
 
NC_009438  Sputcn32_3525  restriction modification system DNA specificity subunit  24.16 
 
 
420 aa  137  5e-31  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_3425  restriction endonuclease S subunits-like  33.19 
 
 
390 aa  135  1.9999999999999998e-30  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.835151  n/a   
 
 
-
 
NC_009637  MmarC7_0016  restriction modification system DNA specificity subunit  25.12 
 
 
432 aa  119  9.999999999999999e-26  Methanococcus maripaludis C7  Archaea  normal  0.0597513  hitchhiker  0.0012471 
 
 
-
 
NC_007947  Mfla_1176  restriction modification system DNA specificity subunit  29.3 
 
 
408 aa  109  7.000000000000001e-23  Methylobacillus flagellatus KT  Bacteria  normal  0.882603  normal 
 
 
-
 
NC_010085  Nmar_0607  restriction modification system DNA specificity subunit  21.38 
 
 
438 aa  108  2e-22  Nitrosopumilus maritimus SCM1  Archaea  n/a    normal 
 
 
-
 
NC_007355  Mbar_A2665  type I restriction-modification system specificity subunit  23.42 
 
 
446 aa  104  2e-21  Methanosarcina barkeri str. Fusaro  Archaea  normal  0.0650221  normal  0.332066 
 
 
-
 
NC_013165  Shel_17660  restriction endonuclease S subunit  36.11 
 
 
416 aa  101  2e-20  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal 
 
 
-
 
NC_008786  Veis_3010  restriction modification system DNA specificity subunit  25.97 
 
 
549 aa  99.8  8e-20  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.340841  normal 
 
 
-
 
NC_009943  Dole_2237  restriction modification system DNA specificity subunit  26.6 
 
 
412 aa  97.8  3e-19  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_1095  hypothetical protein  30.82 
 
 
401 aa  97.4  4e-19  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_008786  Veis_3129  restriction modification system DNA specificity subunit  29.2 
 
 
416 aa  95.1  2e-18  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.343622  normal  0.0250234 
 
 
-
 
NC_014148  Plim_1220  restriction modification system DNA specificity domain protein  28.87 
 
 
620 aa  93.6  5e-18  Planctomyces limnophilus DSM 3776  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_0287  restriction modification system DNA specificity domain protein  24.6 
 
 
429 aa  92.4  1e-17  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013174  Jden_2249  restriction modification system DNA specificity domain protein  26.79 
 
 
384 aa  89.7  8e-17  Jonesia denitrificans DSM 20603  Bacteria  normal  0.153937  normal 
 
 
-
 
NC_010682  Rpic_0448  restriction modification system DNA specificity domain  25.08 
 
 
435 aa  89  1e-16  Ralstonia pickettii 12J  Bacteria  normal  hitchhiker  0.00000159098 
 
 
-
 
NC_007204  Psyc_0878  type I restriction modification system methylase  25.57 
 
 
424 aa  88.6  2e-16  Psychrobacter arcticus 273-4  Bacteria  normal  normal  0.707045 
 
 
-
 
NC_004311  BRA0841  type I restriction-modification system, S subunit  27.31 
 
 
407 aa  87.8  3e-16  Brucella suis 1330  Bacteria  normal  0.629279  n/a   
 
 
-
 
NC_009504  BOV_A0789  type I restriction-modification system, S subunit  27.31 
 
 
407 aa  87.8  3e-16  Brucella ovis ATCC 25840  Bacteria  normal  0.190219  n/a   
 
 
-
 
NC_007760  Adeh_2328  type I restriction-modification system specificity subunit  28.26 
 
 
404 aa  87.4  4e-16  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_0599  type I restriction-modification system, S subunit  24.87 
 
 
458 aa  87.4  4e-16  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_009718  Fnod_0507  restriction modification system DNA specificity subunit  25.5 
 
 
429 aa  87.4  4e-16  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_011726  PCC8801_2214  restriction modification system DNA specificity domain protein  23.2 
 
 
457 aa  87  5e-16  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_007406  Nwi_0268  restriction endonuclease S subunits  28.81 
 
 
444 aa  83.6  0.000000000000005  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.277222  normal 
 
 
-
 
NC_009939  Dgeo_3109  restriction modification system DNA specificity subunit  23.36 
 
 
426 aa  82.8  0.000000000000009  Deinococcus geothermalis DSM 11300  Bacteria  n/a    n/a   
 
 
-
 
NC_013946  Mrub_2452  restriction modification system DNA specificity domain-containing protein  23.94 
 
 
419 aa  82.4  0.00000000000001  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.587532 
 
 
-
 
NC_011059  Paes_0308  restriction modification system DNA specificity domain  24.23 
 
 
456 aa  80.9  0.00000000000004  Prosthecochloris aestuarii DSM 271  Bacteria  normal  0.0548885  normal  0.428283 
 
 
-
 
NC_004347  SO_0382  type I restriction-modification system, S subunit  25.41 
 
 
439 aa  79.3  0.0000000000001  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_011004  Rpal_1502  restriction modification system DNA specificity domain  34.33 
 
 
393 aa  79.3  0.0000000000001  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_1674  restriction modification system DNA specificity domain protein  26.19 
 
 
477 aa  78.2  0.0000000000003  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_008043  TM1040_3540  restriction modification system DNA specificity subunit  32.14 
 
 
387 aa  77  0.0000000000006  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_3914  Restriction endonuclease S subunit  26.24 
 
 
405 aa  77  0.0000000000006  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_007355  Mbar_A3272  type I restriction-modification system specificity subunit  22.84 
 
 
492 aa  75.9  0.000000000001  Methanosarcina barkeri str. Fusaro  Archaea  normal  0.425878  normal  0.243207 
 
 
-
 
NC_008043  TM1040_3550  restriction modification system DNA specificity subunit  23.17 
 
 
417 aa  75.9  0.000000000001  Ruegeria sp. TM1040  Bacteria  normal  0.257959  normal  0.256697 
 
 
-
 
NC_009049  Rsph17029_1858  restriction modification system DNA specificity subunit  24.12 
 
 
456 aa  75.9  0.000000000001  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_3081  restriction modification system DNA specificity domain protein  25 
 
 
415 aa  75.1  0.000000000002  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.758933 
 
 
-
 
NC_008573  Shewana3_4163  restriction modification system DNA specificity subunit  20.75 
 
 
405 aa  74.7  0.000000000003  Shewanella sp. ANA-3  Bacteria  normal  0.864984  normal  0.0584456 
 
 
-
 
NC_008726  Mvan_0035  hypothetical protein  27.97 
 
 
400 aa  73.9  0.000000000005  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.89444 
 
 
-
 
NC_009654  Mmwyl1_3199  restriction modification system DNA specificity subunit  22.75 
 
 
400 aa  73.6  0.000000000005  Marinomonas sp. MWYL1  Bacteria  normal  0.365834  normal 
 
 
-
 
NC_013203  Apar_0198  restriction modification system DNA specificity domain protein  25.49 
 
 
386 aa  73.2  0.000000000007  Atopobium parvulum DSM 20469  Bacteria  normal  0.719886  decreased coverage  0.000218103 
 
 
-
 
NC_011773  BCAH820_0845  restriction modification system DNA specificity domain protein  25.75 
 
 
495 aa  71.2  0.00000000003  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  2.31571e-19 
 
 
-
 
NC_007298  Daro_1307  restriction modification system DNA specificity subunit  23.91 
 
 
285 aa  70.9  0.00000000004  Dechloromonas aromatica RCB  Bacteria  normal  normal  0.186237 
 
 
-
 
NC_010814  Glov_0637  restriction modification system DNA specificity domain  21.48 
 
 
422 aa  70.9  0.00000000004  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_008709  Ping_0149  restriction modification system DNA specificity subunit  27.86 
 
 
400 aa  70.5  0.00000000006  Psychromonas ingrahamii 37  Bacteria  normal  normal 
 
 
-
 
NC_011761  AFE_0686  type I restriction-modification system, S subunit, putative  27.08 
 
 
561 aa  69.3  0.0000000001  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  0.840975  n/a   
 
 
-
 
NC_011206  Lferr_0835  restriction modification system DNA specificity domain  27.08 
 
 
563 aa  69.3  0.0000000001  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  0.835919  normal  0.945638 
 
 
-
 
NC_007955  Mbur_0508  restriction modification system DNA specificity subunit  26.76 
 
 
511 aa  68.2  0.0000000002  Methanococcoides burtonii DSM 6242  Archaea  normal  n/a   
 
 
-
 
NC_012793  GWCH70_1643  restriction modification system DNA specificity domain protein  20.64 
 
 
428 aa  68.2  0.0000000002  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_3793  restriction modification system DNA specificity subunit  21.91 
 
 
425 aa  68.6  0.0000000002  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_009483  Gura_4042  restriction modification system DNA specificity subunit  28.99 
 
 
428 aa  68.2  0.0000000002  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_3768  restriction modification system DNA specificity subunit  26.86 
 
 
374 aa  67.8  0.0000000003  Frankia sp. EAN1pec  Bacteria  normal  0.36553  normal 
 
 
-
 
NC_010506  Swoo_0501  restriction modification system DNA specificity subunit  25 
 
 
612 aa  67.8  0.0000000003  Shewanella woodyi ATCC 51908  Bacteria  normal  normal  0.435558 
 
 
-
 
NC_010730  SYO3AOP1_1357  restriction modification system DNA specificity domain  21.3 
 
 
425 aa  66.6  0.0000000007  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  normal  0.0971497  n/a   
 
 
-
 
NC_007908  Rfer_0030  restriction modification system DNA specificity subunit  24.19 
 
 
447 aa  65.9  0.000000001  Rhodoferax ferrireducens T118  Bacteria  normal  0.539395  n/a   
 
 
-
 
NC_011830  Dhaf_3953  restriction modification system DNA specificity domain protein  24.7 
 
 
413 aa  65.5  0.000000002  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_011668  Sbal223_4472  restriction modification system DNA specificity domain protein  25.65 
 
 
428 aa  65.5  0.000000002  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_012039  Cla_0347  type I restriction-modification system, S subunit  26.06 
 
 
390 aa  65.1  0.000000002  Campylobacter lari RM2100  Bacteria  hitchhiker  0.00000269296  n/a   
 
 
-
 
NC_012917  PC1_0864  restriction modification system DNA specificity domain protein  21.93 
 
 
413 aa  65.5  0.000000002  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.0689213  n/a   
 
 
-
 
NC_007969  Pcryo_1360  restriction modification system DNA specificity subunit  24.47 
 
 
453 aa  64.7  0.000000003  Psychrobacter cryohalolentis K5  Bacteria  normal  normal  0.502069 
 
 
-
 
NC_009707  JJD26997_1911  hypothetical protein  22.86 
 
 
453 aa  64.3  0.000000003  Campylobacter jejuni subsp. doylei 269.97  Bacteria  normal  0.568524  n/a   
 
 
-
 
NC_009801  EcE24377A_0287  type I restriction modification DNA specificity domain-containing protein  25.84 
 
 
471 aa  64.7  0.000000003  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_008787  CJJ81176_0777  type I restriction modification DNA specificity domain-containing protein  21.48 
 
 
422 aa  64.3  0.000000004  Campylobacter jejuni subsp. jejuni 81-176  Bacteria  decreased coverage  0.00318537  n/a   
 
 
-
 
NC_009712  Mboo_1032  restriction modification system DNA specificity subunit  25.54 
 
 
457 aa  64.3  0.000000004  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.41908  normal  0.322454 
 
 
-
 
NC_011761  AFE_0829  type I restriction-modification system, S subunit  27.19 
 
 
409 aa  63.9  0.000000005  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  0.232689  n/a   
 
 
-
 
NC_009715  CCV52592_1061  putative type I restriction-modification system, S subunit  22.54 
 
 
528 aa  63.9  0.000000005  Campylobacter curvus 525.92  Bacteria  normal  n/a   
 
 
-
 
NC_011206  Lferr_0967  restriction modification system DNA specificity domain  27.32 
 
 
426 aa  63.2  0.000000008  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  0.800586  normal  0.821104 
 
 
-
 
NC_011898  Ccel_2722  restriction modification system DNA specificity domain protein  24.7 
 
 
385 aa  62.4  0.00000001  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_011060  Ppha_1219  restriction modification system DNA specificity domain  21.2 
 
 
412 aa  62  0.00000002  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_1027  restriction modification system DNA specificity subunit  24.62 
 
 
420 aa  62.4  0.00000002  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_013161  Cyan8802_0727  restriction modification system DNA specificity domain protein  21.12 
 
 
400 aa  61.6  0.00000003  Cyanothece sp. PCC 8802  Bacteria  normal  normal  0.0968972 
 
 
-
 
NC_012669  Bcav_1496  restriction modification system DNA specificity domain protein  23.08 
 
 
427 aa  61.2  0.00000003  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.136919  normal 
 
 
-
 
NC_013161  Cyan8802_3132  restriction modification system DNA specificity domain protein  24.66 
 
 
424 aa  60.8  0.00000004  Cyanothece sp. PCC 8802  Bacteria  normal  normal  0.474681 
 
 
-
 
NC_013093  Amir_0959  restriction modification system DNA specificity domain protein  21.37 
 
 
442 aa  60.8  0.00000004  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_3382  restriction modification system DNA specificity subunit  27.5 
 
 
485 aa  60.5  0.00000005  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_008009  Acid345_3757  restriction modification system S subunit  21.28 
 
 
436 aa  60.5  0.00000006  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.386531  normal 
 
 
-
 
NC_013037  Dfer_5244  restriction modification system DNA specificity domain  24.29 
 
 
422 aa  60.1  0.00000007  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_1060  restriction modification system DNA specificity subunit  25.39 
 
 
397 aa  58.5  0.0000002  Rhodoferax ferrireducens T118  Bacteria  normal  0.588803  n/a   
 
 
-
 
NC_007951  Bxe_A0223  putative HsdS protein  25.34 
 
 
438 aa  58.9  0.0000002  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_008345  Sfri_1954  restriction modification system DNA specificity subunit  27.59 
 
 
406 aa  58.5  0.0000002  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_011149  SeAg_B4821  type I restriction-modification system, endonuclease S subunit  27.32 
 
 
382 aa  58.5  0.0000002  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_3297  restriction modification system DNA specificity subunit  24.26 
 
 
430 aa  58.2  0.0000003  Chloroflexus aggregans DSM 9485  Bacteria  normal  hitchhiker  0.000489204 
 
 
-
 
NC_012917  PC1_2875  restriction modification system DNA specificity domain protein  24.86 
 
 
390 aa  58.2  0.0000003  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_2097  restriction modification system DNA specificity subunit  24.58 
 
 
393 aa  58.2  0.0000003  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_1978  restriction modification system DNA specificity subunit  32.97 
 
 
616 aa  57.4  0.0000004  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_010717  PXO_02063  type I restriction-modification system, S subunit  28.42 
 
 
501 aa  57.4  0.0000004  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_2423  restriction modification system DNA specificity subunit  29.08 
 
 
426 aa  56.6  0.0000007  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.57431  normal 
 
 
-
 
NC_011061  Paes_2397  restriction modification system DNA specificity domain  24.74 
 
 
417 aa  56.2  0.0000009  Prosthecochloris aestuarii DSM 271  Bacteria  hitchhiker  0.000238697  n/a   
 
 
-
 
NC_013730  Slin_3089  restriction modification system DNA specificity domain protein  22.22 
 
 
520 aa  56.2  0.0000009  Spirosoma linguale DSM 74  Bacteria  normal  0.497517  normal  0.376247 
 
 
-
 
NC_007484  Noc_1808  restriction modification system DNA specificity subunit  23.15 
 
 
483 aa  55.8  0.000001  Nitrosococcus oceani ATCC 19707  Bacteria  normal  0.300643  n/a   
 
 
-
 
NC_007484  Noc_3030  restriction modification system DNA specificity subunit  28.45 
 
 
564 aa  55.8  0.000001  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_2960  restriction modification system DNA specificity subunit  24.19 
 
 
587 aa  55.8  0.000001  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_007413  Ava_3499  restriction modification system DNA specificity subunit  21.11 
 
 
405 aa  55.1  0.000002  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.082109 
 
 
-
 
NC_008740  Maqu_0414  restriction modification system DNA specificity subunit  25.08 
 
 
439 aa  55.1  0.000002  Marinobacter aquaeolei VT8  Bacteria  normal  0.405933  n/a   
 
 
-
 
NC_009801  EcE24377A_2910  putative type I restriction-modification system, S subunit  22.1 
 
 
373 aa  55.5  0.000002  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_009975  MmarC6_0041  restriction modification system DNA specificity subunit  24.66 
 
 
397 aa  55.5  0.000002  Methanococcus maripaludis C6  Archaea  normal  n/a   
 
 
-
 
NC_011899  Hore_20210  restriction modification system DNA specificity domain protein  33.33 
 
 
565 aa  54.7  0.000003  Halothermothrix orenii H 168  Bacteria  normal  0.266778  n/a   
 
 
-
 
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