Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A2665 |
Symbol | |
ID | 3624775 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | - |
Start bp | 3375000 |
End bp | 3376340 |
Gene Length | 1341 bp |
Protein Length | 446 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 637701521 |
Product | type I restriction-modification system specificity subunit |
Protein accession | YP_306151 |
Protein GI | 73670136 |
COG category | [V] Defense mechanisms |
COG ID | [COG0732] Restriction endonuclease S subunits |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0650221 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.332066 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGAGAG TAAATACATC AAATTCTTGG AAAAAAGTTC CAATAAAAAA TTTGTACTTG GGTTTATATG ATGGACCTCA TGCTACGCCT AAACCTTCTT TGAGTGGACC AATATTTTTA GGAATAAAAA ATATTACTGA AGATGGTAGG CTAGATTTAT CTCAAATTAG GAACATCTCA GAAGATGATT TTCCAAAATG GACAAAAAGA GTTCTTCCAA CAGAGGGAGA TATAGTATTC AGCTATGAAG CTACGTTAAA TCTCTATGCA ATGATTCCTA AAGGGTTTCG AGGATGTCTT GGTAGAAGGC TTGCACTTAT AAGACCCGAT ACTGAAATTG TAAATCCAAA ATTCTTGTAC TATTCTTTTT TTGGAGAAGA ATGGAGAAAT ACTATCTCTA AAAATTTAAT TTCTGGTGCA ACAGTTGATC GAATTCCTCT TATAAATTTT CCAAACTTTG AAGTTTCTAT ACCTATTCAT TCAATCCAAA GAAAAATCGC CTCCATCCTC TCTAATTATG ATAATCTTAT CGAAAACAAC ACCCGACGAA TAGAAATTCT TGAACAGATA GCAAAGCTGG TGTACGAAGA ATGGTTCGTT AAGTTCAGGT TTCCGGGGCA CGAAAATGTA GAAATGGTAT CTTCGGAATT AGGGGAGATT CCGGAGGGGT GGAAAGTAGA AAAATTATCT GAACTGGTCA AAACACAATA TGGATATACA GAAAGTGCAA CCGAAGAAGA AATTGGCCCA AAGTTTTTGA GGGGTAAAGA TATCAATAAA CAGTCATACA TTTCCTGGGA CGAAGTGCCT TTTTGTTCGA TTTCTCCTGA AGTTTTAGAT AAATATCTCT TAAAGAAAGG AGATATTGTT GTTATAAGAA TGGCCGATCC CGGTAAAGTT GGAATTGTTG AAACAGAAGT TAATGCTGTA TTTGCTTCTT ACTTGATAAG ACTGGAAATA ATTAAAAATA TCAAGCCTTA TTATTTGTTT TACTTTTTAC AGTCAGACAA ATTTCAAAAT TATGTAATCG CTGCATCGAC AGGGACTACC AGAAAAAGTG CCAGTGCAGG TGTAATTACT AACATTGACT TAATAATTCC ACCTGAATAC TTATTAACAT TATTTGAAGA TAAAATTGGA CTTCTTAGAA AGCAATTGAA TATATTAATT AACAAAAACC AAAATCTCCG CAAAACCCGC GACCTTCTTC TCCCAAAACT CATTTCAGGA GAAATCGACG TTTCGGATCT GGATATTAGC ATAAGAAATG AGTATCAGGA GCATAATATT AATTTTGGAG AGCCACAAGA TGAGGAAGGA CTCAGATCTA AAATGGGCTG A
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Protein sequence | MPRVNTSNSW KKVPIKNLYL GLYDGPHATP KPSLSGPIFL GIKNITEDGR LDLSQIRNIS EDDFPKWTKR VLPTEGDIVF SYEATLNLYA MIPKGFRGCL GRRLALIRPD TEIVNPKFLY YSFFGEEWRN TISKNLISGA TVDRIPLINF PNFEVSIPIH SIQRKIASIL SNYDNLIENN TRRIEILEQI AKLVYEEWFV KFRFPGHENV EMVSSELGEI PEGWKVEKLS ELVKTQYGYT ESATEEEIGP KFLRGKDINK QSYISWDEVP FCSISPEVLD KYLLKKGDIV VIRMADPGKV GIVETEVNAV FASYLIRLEI IKNIKPYYLF YFLQSDKFQN YVIAASTGTT RKSASAGVIT NIDLIIPPEY LLTLFEDKIG LLRKQLNILI NKNQNLRKTR DLLLPKLISG EIDVSDLDIS IRNEYQEHNI NFGEPQDEEG LRSKMG
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