Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_3499 |
Symbol | |
ID | 3679772 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 4340130 |
End bp | 4341347 |
Gene Length | 1218 bp |
Protein Length | 405 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 637718851 |
Product | restriction modification system DNA specificity subunit |
Protein accession | YP_324001 |
Protein GI | 75909705 |
COG category | [V] Defense mechanisms |
COG ID | [COG0732] Restriction endonuclease S subunits |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.082109 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATTGTA TAGAATTGAG TCTTGCTGAT ACTTGTGAAT TTATAAATGG AGGTGCATGG TCTGATAAAG AGTATGTAGA AGCCGGAATT CCTGTTGTAA AAGTCACTAA CATGGTTGAT GGCACAATTG AAACTAATAA TCTTAGCTAT CTACCATTAT CAAGTTCTGA TAAATACAAA AAACATTTAT TATTTGTTAA CGATTTAGTA GTTACCACTG TTGGCTCTCA TCCAACACAA CCGGGGTCAG TAGTTGGTAG AACGTCAGTT GTACCACAAC ATTTTGATGG AGCTTTTCTA AATCAAAATG CGGTATGTAT TAGAGTCAAA TGTAAAAATT TAATATCTCC AAAATTTCTG ATATATATAT CTAAAACTAT ATTATTCAAG CATCATATTG AATCACGAGC TAGAGGTAGT GCAAACCAGG TAAGGATGGC ACTTGGAGAG TTGAAAAAAT TTACATTCAA ATTTCCCCCT CTTCCGGTTC AGAAAAAGAT TGCGGCGATA CTTTCTGCTT ATGATGACCT GATTGAAAAC AATAATCGCC GTATTGCCAT ATTAGAAAAA ATGGCTGAGG AAATCTACCG CGAGTGGTTT GTGCGTCTGC GCTTTCCGGG TCATGAACAG GTTAAGTTTA ATAAAGGCAT CCCGGAGAGT TGGGAGAGAA AAAGGTTCGA TGAATTTTGT CTACTCCAGC GTGGGTATGA TCTACCAGAT ACTCAAGTAA TTCCTGGTCA ATATCCTGTT ATCGCGTCAA CTTCAATTAA AACTTACCAT AATCAATTTA AAGTTAACCC TCCAGTAATT ACAACTGGTC GTTCAGGCTC TTTAGGCATA ATTTTATTCA TCAATAGTCA AGCATGGCCT TTAAACACGA CATTATTTGT AAAAAACTTT TATGGTAATT CACCCTATTT GATTTACTAC ACACTAAAAT TCTTAAAACT TGAGAATTTT AATTCTGGTG CTGGTGTACC CACACTAAAC AGAAATCATT TAGGTGGACT ATATATGTCC GTTCCTCCTA AAAGCCTGCA AAATAATTTC AATGACAAAA TTGCAATTCT CTTTAAGCAA AAAGAGCTTT TATCAAAGTC AAAGAATGCA CTTATTGAAA TACGCGATCG CCTACTAACT CGTCTTATCT CAGGTAAGCT TTCCGTCGAA GACTTAGACA TCCAATTCCC GCCCAGCATG ACAGAAGAAT TAAAATAA
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Protein sequence | MNCIELSLAD TCEFINGGAW SDKEYVEAGI PVVKVTNMVD GTIETNNLSY LPLSSSDKYK KHLLFVNDLV VTTVGSHPTQ PGSVVGRTSV VPQHFDGAFL NQNAVCIRVK CKNLISPKFL IYISKTILFK HHIESRARGS ANQVRMALGE LKKFTFKFPP LPVQKKIAAI LSAYDDLIEN NNRRIAILEK MAEEIYREWF VRLRFPGHEQ VKFNKGIPES WERKRFDEFC LLQRGYDLPD TQVIPGQYPV IASTSIKTYH NQFKVNPPVI TTGRSGSLGI ILFINSQAWP LNTTLFVKNF YGNSPYLIYY TLKFLKLENF NSGAGVPTLN RNHLGGLYMS VPPKSLQNNF NDKIAILFKQ KELLSKSKNA LIEIRDRLLT RLISGKLSVE DLDIQFPPSM TEELK
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