Gene Ava_3499 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3499 
Symbol 
ID3679772 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4340130 
End bp4341347 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content36% 
IMG OID637718851 
Productrestriction modification system DNA specificity subunit 
Protein accessionYP_324001 
Protein GI75909705 
COG category[V] Defense mechanisms 
COG ID[COG0732] Restriction endonuclease S subunits 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.082109 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTGTA TAGAATTGAG TCTTGCTGAT ACTTGTGAAT TTATAAATGG AGGTGCATGG 
TCTGATAAAG AGTATGTAGA AGCCGGAATT CCTGTTGTAA AAGTCACTAA CATGGTTGAT
GGCACAATTG AAACTAATAA TCTTAGCTAT CTACCATTAT CAAGTTCTGA TAAATACAAA
AAACATTTAT TATTTGTTAA CGATTTAGTA GTTACCACTG TTGGCTCTCA TCCAACACAA
CCGGGGTCAG TAGTTGGTAG AACGTCAGTT GTACCACAAC ATTTTGATGG AGCTTTTCTA
AATCAAAATG CGGTATGTAT TAGAGTCAAA TGTAAAAATT TAATATCTCC AAAATTTCTG
ATATATATAT CTAAAACTAT ATTATTCAAG CATCATATTG AATCACGAGC TAGAGGTAGT
GCAAACCAGG TAAGGATGGC ACTTGGAGAG TTGAAAAAAT TTACATTCAA ATTTCCCCCT
CTTCCGGTTC AGAAAAAGAT TGCGGCGATA CTTTCTGCTT ATGATGACCT GATTGAAAAC
AATAATCGCC GTATTGCCAT ATTAGAAAAA ATGGCTGAGG AAATCTACCG CGAGTGGTTT
GTGCGTCTGC GCTTTCCGGG TCATGAACAG GTTAAGTTTA ATAAAGGCAT CCCGGAGAGT
TGGGAGAGAA AAAGGTTCGA TGAATTTTGT CTACTCCAGC GTGGGTATGA TCTACCAGAT
ACTCAAGTAA TTCCTGGTCA ATATCCTGTT ATCGCGTCAA CTTCAATTAA AACTTACCAT
AATCAATTTA AAGTTAACCC TCCAGTAATT ACAACTGGTC GTTCAGGCTC TTTAGGCATA
ATTTTATTCA TCAATAGTCA AGCATGGCCT TTAAACACGA CATTATTTGT AAAAAACTTT
TATGGTAATT CACCCTATTT GATTTACTAC ACACTAAAAT TCTTAAAACT TGAGAATTTT
AATTCTGGTG CTGGTGTACC CACACTAAAC AGAAATCATT TAGGTGGACT ATATATGTCC
GTTCCTCCTA AAAGCCTGCA AAATAATTTC AATGACAAAA TTGCAATTCT CTTTAAGCAA
AAAGAGCTTT TATCAAAGTC AAAGAATGCA CTTATTGAAA TACGCGATCG CCTACTAACT
CGTCTTATCT CAGGTAAGCT TTCCGTCGAA GACTTAGACA TCCAATTCCC GCCCAGCATG
ACAGAAGAAT TAAAATAA
 
Protein sequence
MNCIELSLAD TCEFINGGAW SDKEYVEAGI PVVKVTNMVD GTIETNNLSY LPLSSSDKYK 
KHLLFVNDLV VTTVGSHPTQ PGSVVGRTSV VPQHFDGAFL NQNAVCIRVK CKNLISPKFL
IYISKTILFK HHIESRARGS ANQVRMALGE LKKFTFKFPP LPVQKKIAAI LSAYDDLIEN
NNRRIAILEK MAEEIYREWF VRLRFPGHEQ VKFNKGIPES WERKRFDEFC LLQRGYDLPD
TQVIPGQYPV IASTSIKTYH NQFKVNPPVI TTGRSGSLGI ILFINSQAWP LNTTLFVKNF
YGNSPYLIYY TLKFLKLENF NSGAGVPTLN RNHLGGLYMS VPPKSLQNNF NDKIAILFKQ
KELLSKSKNA LIEIRDRLLT RLISGKLSVE DLDIQFPPSM TEELK