Gene Bcav_3914 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3914 
Symbol 
ID7858727 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp4333406 
End bp4334623 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content62% 
IMG OID643868017 
ProductRestriction endonuclease S subunit 
Protein accessionYP_002883917 
Protein GI229822391 
COG category[V] Defense mechanisms 
COG ID[COG0732] Restriction endonuclease S subunits 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTAGCC AGAGGCGATG CAAGATCGCC GATCTTGCAT CGAGCTCGGC AGGCTCTATC 
GCGATCGGCC CCTTTGGGTC AGCGCTGAAA GCGGAACTCT ATACGGAGTC CGGCGTTCCC
GTGCTCCGCG GGCAGGACAT AGGCGTCGGT AAGCACCCGC AACGCTCTGG CACCTTTGTG
GCGCCGGAGA CAGCGAGGCG CCTTGCCAGG TCGCTGGTGA GGGAGGGGGA CCTCGTGTTT
CCACATCGGG GTGCGATCGG GGAAGTCGGT CTCATTGGCG ACGACGAGTT TCTTCTGTCG
TCGAGCATGA TGAAGCTCAC AGTCGATAGA AGCAAGGCTG AACCAGCGTT CCTGATGTAC
TACTTCCGTG GTCCAGGTCG GCGCGAACTC ATGATGCGTG CATCTACTGT TGGGACGCCT
GGGATCGCTC AACCGTTGGC ATCTCTTCGG GAGATCGATT TGGCGCTTCC TTCGTTAGGT
GAGCAACGAG CGATCGCGGA GGTGCTGGGC GCGCTGGACG ACAAGATCGC CGCGAACACC
AAGCTCGCCG CCACTGCCGA CGCGCTAGCG ATGTCGCTGT TCGTCCGCTC GCTTGGCTCA
GAGACGCGTG AGTACGAGAT CTCCGAGGTG GCAGACCTTG TGACACGCGG TATCACGCCG
AGCTATGTCG ACGGAGGGTC GGATGCGACG ATGGTTCTTG GCCAGCGCTG CGTCCGTGGG
CAGAGGGTCG ACCTAGGGCC GGCGCGGTGG ACCGATCCCG CGAGAGTAAA GTCGGAGAAG
CTTCTGTCGC CGGGTGATGT TCTCATCAAC TCCACCGGTA TGGGTTCGCT AGGTCGTGTT
GGTCGGTGGA CATACGCGCG GGAAGCGACG GTCGATTCCC ACGTCACTCT CGTTCGATTC
AACGACGCTG TGGTGAACAC GACCTTTGCC GGCTTCGCCC TCTTGCGGCT CGAGCGCGAG
ATCGAGGTGC TGGCCGAGGG CAGCACTGGG CAGACGGAAC TACCCCGGGG CTCGCTCGCC
AGGATGAAGA TCTGCGTACC GTCGAATGAG AATGCTCTGC CGCTTGCAGA AACCCTTGAT
GCACTCGTAG CGATGGCGGA GCAAGTAAGA AACGAAAAGC AGGCACTCGC GGCGACGCGG
GACGCGCTCC TGCCGCAGCT CATGTCGGGC AAGCTCACGG TCCATGCCGC GGAGGCAATC
GCTGAGGAGC TGGCATGA
 
Protein sequence
MASQRRCKIA DLASSSAGSI AIGPFGSALK AELYTESGVP VLRGQDIGVG KHPQRSGTFV 
APETARRLAR SLVREGDLVF PHRGAIGEVG LIGDDEFLLS SSMMKLTVDR SKAEPAFLMY
YFRGPGRREL MMRASTVGTP GIAQPLASLR EIDLALPSLG EQRAIAEVLG ALDDKIAANT
KLAATADALA MSLFVRSLGS ETREYEISEV ADLVTRGITP SYVDGGSDAT MVLGQRCVRG
QRVDLGPARW TDPARVKSEK LLSPGDVLIN STGMGSLGRV GRWTYAREAT VDSHVTLVRF
NDAVVNTTFA GFALLRLERE IEVLAEGSTG QTELPRGSLA RMKICVPSNE NALPLAETLD
ALVAMAEQVR NEKQALAATR DALLPQLMSG KLTVHAAEAI AEELA