| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3540 |
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| Symbol | |
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| ID | 4075218 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | - |
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| Start bp | 579025 |
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| End bp | 580188 |
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| Gene Length | 1164 bp |
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| Protein Length | 387 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 638005054 |
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| Product | restriction modification system DNA specificity subunit |
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| Protein accession | YP_611773 |
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| Protein GI | 99078515 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0732] Restriction endonuclease S subunits |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTCAG TGGCCCTCGG TGAGTTGGTT GAAATCAGAG GCGGCGGCAC GCCGGACAAG
AAGGTTCCAG ATTACTGGGA CGGCGATATT CCTTGGGCAT CTGTGAAGGA CTTCAAAAGC
ACATCGCTCG CCTCAACCAT CGACCGGATA ACGCAAGCGG GTGTCGCGAA CTCTGCCACT
CAAGTTATCC CTGCTGGAAA CATTATCGTC CCGACGCGTA TGGCGGTTGG TAAGGCAGCA
ATCAATGAGA TCGACCTAGC GATCAATCAA GACCTGAAGG CGCTGATCCC AAGCCAACGG
ATCGACCGCC AATACCTTCT GCATGCCCTT CTAGCCAACG CAAAGACGCT CGAAGACCAA
GCCACAGGGG CTACCGTGAA GGGCATCAAG CTTGATGCTT TGAGATCTTT ACAAATCCCC
CTCCCTCCGT TGCAGGAGCA GAGGCGGATT GCGGGAATAC TGGATCAGGC AGACGCGCTC
CGCCGCTTCC GCACCCGCGC CCTCGACAAA CTGGGCACCC TCGGCCAGGC GATCTTTCAT
GAGATGTTTG GGGCAAGCTC TCCTGACCAT GCTGCGTGGG AGAAAATCAA TCTGAGCGAA
CTGGTTCTGC CTGATGACCG CATCAATTAT GGTGTCGTAC AGCCTGGCCC TCACGACCCC
GAAGGGGTTC CGATCATTCG TGTCGCCGAT CTAGCGAGCC CGGTGGTCGC TTTTGATTCA
ATCAAACGGA TCGCCCCGAG CATTGATGCA GAGTACGGGC GTTCAAGATT GAAGGGCGGT
GAAGTGCTAA TCGGCTGCGT CGGTTCGATT GGCACGACAA TCATCGCTCC TCCAGAGTTC
GCAGGAGCAA ATGTTGCTCG CGCGGTTGCG CGTGTTCCCC TCGACACCAG CAGATGTGAA
CCGAGGTTTG TCGCTGAGCA ACTACGATCT CAGCGGATAC AAAATTACTT CACAAAAGAG
GTCCGGCTTG TTGCGCAGCC CACCCTGAAC ATCAAGCAAA TTCGCGAGAC AGAAATCATT
CTTCCGCCAA AGGAGCTGCA GGTTTCGTTT GTTGAACGTG TTCATGAAAT CGAAGCCCAA
AAAGCCCAGC ACGCAGCAGC TCTGACGGCA TGCGACGTGC TCTTTGCTTC CCTTCAGTCA
ACGGCTTTCC GGGGGGAAGT GTAA
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| Protein sequence | MSSVALGELV EIRGGGTPDK KVPDYWDGDI PWASVKDFKS TSLASTIDRI TQAGVANSAT
QVIPAGNIIV PTRMAVGKAA INEIDLAINQ DLKALIPSQR IDRQYLLHAL LANAKTLEDQ
ATGATVKGIK LDALRSLQIP LPPLQEQRRI AGILDQADAL RRFRTRALDK LGTLGQAIFH
EMFGASSPDH AAWEKINLSE LVLPDDRINY GVVQPGPHDP EGVPIIRVAD LASPVVAFDS
IKRIAPSIDA EYGRSRLKGG EVLIGCVGSI GTTIIAPPEF AGANVARAVA RVPLDTSRCE
PRFVAEQLRS QRIQNYFTKE VRLVAQPTLN IKQIRETEII LPPKELQVSF VERVHEIEAQ
KAQHAAALTA CDVLFASLQS TAFRGEV
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