Gene PC1_0864 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_0864 
Symbol 
ID8131789 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp1005819 
End bp1007060 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content43% 
IMG OID644864145 
Productrestriction modification system DNA specificity domain protein 
Protein accessionYP_003016451 
Protein GI253687261 
COG category[V] Defense mechanisms 
COG ID[COG0732] Restriction endonuclease S subunits 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0689213 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTCGATC TAATAGTGGA TAAACAGCAG TCCGGTGCCG CAGGGAAAGG TGTTCCTGCT 
GGCTGGCTCC AGTGTAAATT GGGTGATGTG TTAACCCTAC AACGTGGCTT TGATTTACCT
CAACGTTTAA GAAAAGAAGG CAACATCCCA ATTATTTCTT CGTCTGGAGA AAGCGGTTGG
CATAACAACG CTATCGTTTC ACCACCAGGT ATTGTTACAG GGCGATATGG CACTATTGGC
GAAGTATTTT TCATTGATAA GCCTTTTTGG CCGCTCAATA CAACGCTTTA CGTTCGGGAG
TTCAAAGGAA TTACACCTTC TTATGCCTAC TTCTTACTTA AGACGGTAGA TTTCCAATCT
CACAGTGGCA AAAGCGGTGT TCCGGGTGTT AATCGTAATG ATGTGCATCA GGAAAATATT
CTTTTACCTC CGATAAAAGA ACAAATTGCT ATCACCACTA CGCTGTCAAA TATTGACGAG
TTAATTAGTG CTTTAGAAAG ATTACTATCC AAAAAACAAG CTATCAAAAC AGCCACCATG
CAACAACTGC TTACGGGTAA AACCCGTTTG CCGCAGTTTG CGTTGCGGGA GGATGGGGCT
GCTAAGGGAT ACCAAAAAAG TGAATTAGGG GAAATCCCTG AGGATTGGAC AGTTACTCTA
CTGAATGATG TTATAGATTC CTGCTCAAGT GGAGCAACAC CATATCGTGG TATTTCTGAA
TATTACAAAG GAAACAACCG CTGGATCACC AGTGGTGAGC TCAATTATTG TGTTATCAAT
GACACAATAG AGAAAATTAG TGACAGTGCT ATTAAATATA CAAATCTGAA AATTCATCCC
GCAGGAACAT TCCTGATGGC GATAACAGGT CTTGAAGCCG CAGGAACACG CGGCGCTTGT
GGGATTGTCG GTAAACCTTC TGCTACAAAT CAGTCTTGTA TGGCTATCTA TCCCAATAAT
AAGCTGGATA GTAACTATCT TTATCACTGG TATGTTTACA ATGGTGATAC CTTGGCATTT
AAATACTGTC AGGGGACAAA ACAATTAAGC TATACGGCTG GTTTAATTAG AAAAATACCA
TTGTTCTTAC CAACTGATAA AAAAGAACAA ACCGCCATCG CCGCCATCCT CTCCGATATG
GACAAGGACA TTCAGACCCT GCAACAGCGT CTGGAGAAAA CCCGCCAGCT TAAGCAGGGG
ATGATGCAGG AACTGTTAAC CGGGAAAACC CGCTTAATAT AG
 
Protein sequence
MVDLIVDKQQ SGAAGKGVPA GWLQCKLGDV LTLQRGFDLP QRLRKEGNIP IISSSGESGW 
HNNAIVSPPG IVTGRYGTIG EVFFIDKPFW PLNTTLYVRE FKGITPSYAY FLLKTVDFQS
HSGKSGVPGV NRNDVHQENI LLPPIKEQIA ITTTLSNIDE LISALERLLS KKQAIKTATM
QQLLTGKTRL PQFALREDGA AKGYQKSELG EIPEDWTVTL LNDVIDSCSS GATPYRGISE
YYKGNNRWIT SGELNYCVIN DTIEKISDSA IKYTNLKIHP AGTFLMAITG LEAAGTRGAC
GIVGKPSATN QSCMAIYPNN KLDSNYLYHW YVYNGDTLAF KYCQGTKQLS YTAGLIRKIP
LFLPTDKKEQ TAIAAILSDM DKDIQTLQQR LEKTRQLKQG MMQELLTGKT RLI