Gene Nmar_0607 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_0607 
Symbol 
ID5774316 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp543154 
End bp544470 
Gene Length1317 bp 
Protein Length438 aa 
Translation table11 
GC content30% 
IMG OID641316242 
Productrestriction modification system DNA specificity subunit 
Protein accessionYP_001581941 
Protein GI161528115 
COG category[V] Defense mechanisms 
COG ID[COG0732] Restriction endonuclease S subunits 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTAAAC CAGGATACAA ACTAGTAAAG TCACTTTTTG GAAAAGAAAT AGAAATTCCT 
GAAACATGGA AAATTTGTAA TCTGGGAGAT CTTTTAACAA AAATACAAGA TGGGAATTAT
GGTGAAAGTT ATCCCAAAGA ATCAGAATTT TTGGATTCTG GAATTCCTTT CATTAGGGGA
ACTGAAATTA CCAAAAATTT CATAGATGGT AAAAAAGTGA AATATATTTC AAAAACTAAA
CATGACGAAC TACAAAAAGC TCACATAGAA ACTGGAGATG TACTTTTTTT GAATCGTGGA
GGAATAACTA GAACTGTTGC AATAGTGCCT CCAAAATATG ATGATGCAAA CATAGGACCA
CAACTAACAT TACTTCGCTG TAATACAAAG ATCATTCACA ACAAATACTT GTATTATTTT
ATTCAAGGGG AAAATTTTAA AAAACAAGTA ATTAGTAGTG ATGCAGGTAC TGCATTACAA
TTTTTTGGAA TTGAAAAAAC TAAAAAATTT AAGATTACTT TACCTGAAAT TAGAGAACAA
CAGAAAATTG TATCAGTATT AAATTCTATA GATAACCTGC TTTCTTCATA CGATAAAACA
ATACAAACAA CCCAGAAATT GAAAAAAGGC TTGATGCAGA AATTACTAAC AAAAGGAATA
GATCACAAAA AATTCAAGAA AGTTCCATGG TTATTTGGAA AAGAGATAGA GATTCCTGAA
GAATGGGAAA TTAAGAAAAT TGAAGATTTA TTCAAATTAA AATCTGGTAG CACCCCATCT
AGGAAAATTC CAGAATATTT TGCTGGAAAT ATTCCTTGGA TAACAAGTAC GGATCTTAAT
CGTTCCAAAA TTACTTCTAC GTTAGAAAAA ATTACTCCTG AAGCAGTAAA ACAAACAAAT
CTGAAATTAC TTCCTAAAGG GACATTTTTG ATTGCGACAT ACGGATTAGA GGCAGCTGGA
ACTAGAGGAA AATGTGGAAT TACTAAAATG GAATCTACTT GTAATCAAGC ATGTATGGCA
TTTTTACCTT CATCTGAAAT TACATCTGAA TTTTTATTTT ACTTTTATCT GTACTTTGGA
GAAAAAATCA TTTTCAGTAT TGCACAAGGA ACAAAACAAC AAAATCTCTA TTCGGATACT
CTCAAAAAAG TTTCCATGTT TGTTCCCCCA CAAAAAGAAC AAAAGAGAAT TGTAAATTTT
CTTGATCAAA TTGATTCTCA TCTCTTTGAA CTAGAATCAA AAAAAACTGG ACTAGACAAA
ATCAAGAAAG GTTTGATACA AAAACTCTTG ACCAGTAAAA TCAGAGTCAA ATTTTAA
 
Protein sequence
MPKPGYKLVK SLFGKEIEIP ETWKICNLGD LLTKIQDGNY GESYPKESEF LDSGIPFIRG 
TEITKNFIDG KKVKYISKTK HDELQKAHIE TGDVLFLNRG GITRTVAIVP PKYDDANIGP
QLTLLRCNTK IIHNKYLYYF IQGENFKKQV ISSDAGTALQ FFGIEKTKKF KITLPEIREQ
QKIVSVLNSI DNLLSSYDKT IQTTQKLKKG LMQKLLTKGI DHKKFKKVPW LFGKEIEIPE
EWEIKKIEDL FKLKSGSTPS RKIPEYFAGN IPWITSTDLN RSKITSTLEK ITPEAVKQTN
LKLLPKGTFL IATYGLEAAG TRGKCGITKM ESTCNQACMA FLPSSEITSE FLFYFYLYFG
EKIIFSIAQG TKQQNLYSDT LKKVSMFVPP QKEQKRIVNF LDQIDSHLFE LESKKTGLDK
IKKGLIQKLL TSKIRVKF