Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nmar_0607 |
Symbol | |
ID | 5774316 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosopumilus maritimus SCM1 |
Kingdom | Archaea |
Replicon accession | NC_010085 |
Strand | + |
Start bp | 543154 |
End bp | 544470 |
Gene Length | 1317 bp |
Protein Length | 438 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 641316242 |
Product | restriction modification system DNA specificity subunit |
Protein accession | YP_001581941 |
Protein GI | 161528115 |
COG category | [V] Defense mechanisms |
COG ID | [COG0732] Restriction endonuclease S subunits |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTAAAC CAGGATACAA ACTAGTAAAG TCACTTTTTG GAAAAGAAAT AGAAATTCCT GAAACATGGA AAATTTGTAA TCTGGGAGAT CTTTTAACAA AAATACAAGA TGGGAATTAT GGTGAAAGTT ATCCCAAAGA ATCAGAATTT TTGGATTCTG GAATTCCTTT CATTAGGGGA ACTGAAATTA CCAAAAATTT CATAGATGGT AAAAAAGTGA AATATATTTC AAAAACTAAA CATGACGAAC TACAAAAAGC TCACATAGAA ACTGGAGATG TACTTTTTTT GAATCGTGGA GGAATAACTA GAACTGTTGC AATAGTGCCT CCAAAATATG ATGATGCAAA CATAGGACCA CAACTAACAT TACTTCGCTG TAATACAAAG ATCATTCACA ACAAATACTT GTATTATTTT ATTCAAGGGG AAAATTTTAA AAAACAAGTA ATTAGTAGTG ATGCAGGTAC TGCATTACAA TTTTTTGGAA TTGAAAAAAC TAAAAAATTT AAGATTACTT TACCTGAAAT TAGAGAACAA CAGAAAATTG TATCAGTATT AAATTCTATA GATAACCTGC TTTCTTCATA CGATAAAACA ATACAAACAA CCCAGAAATT GAAAAAAGGC TTGATGCAGA AATTACTAAC AAAAGGAATA GATCACAAAA AATTCAAGAA AGTTCCATGG TTATTTGGAA AAGAGATAGA GATTCCTGAA GAATGGGAAA TTAAGAAAAT TGAAGATTTA TTCAAATTAA AATCTGGTAG CACCCCATCT AGGAAAATTC CAGAATATTT TGCTGGAAAT ATTCCTTGGA TAACAAGTAC GGATCTTAAT CGTTCCAAAA TTACTTCTAC GTTAGAAAAA ATTACTCCTG AAGCAGTAAA ACAAACAAAT CTGAAATTAC TTCCTAAAGG GACATTTTTG ATTGCGACAT ACGGATTAGA GGCAGCTGGA ACTAGAGGAA AATGTGGAAT TACTAAAATG GAATCTACTT GTAATCAAGC ATGTATGGCA TTTTTACCTT CATCTGAAAT TACATCTGAA TTTTTATTTT ACTTTTATCT GTACTTTGGA GAAAAAATCA TTTTCAGTAT TGCACAAGGA ACAAAACAAC AAAATCTCTA TTCGGATACT CTCAAAAAAG TTTCCATGTT TGTTCCCCCA CAAAAAGAAC AAAAGAGAAT TGTAAATTTT CTTGATCAAA TTGATTCTCA TCTCTTTGAA CTAGAATCAA AAAAAACTGG ACTAGACAAA ATCAAGAAAG GTTTGATACA AAAACTCTTG ACCAGTAAAA TCAGAGTCAA ATTTTAA
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Protein sequence | MPKPGYKLVK SLFGKEIEIP ETWKICNLGD LLTKIQDGNY GESYPKESEF LDSGIPFIRG TEITKNFIDG KKVKYISKTK HDELQKAHIE TGDVLFLNRG GITRTVAIVP PKYDDANIGP QLTLLRCNTK IIHNKYLYYF IQGENFKKQV ISSDAGTALQ FFGIEKTKKF KITLPEIREQ QKIVSVLNSI DNLLSSYDKT IQTTQKLKKG LMQKLLTKGI DHKKFKKVPW LFGKEIEIPE EWEIKKIEDL FKLKSGSTPS RKIPEYFAGN IPWITSTDLN RSKITSTLEK ITPEAVKQTN LKLLPKGTFL IATYGLEAAG TRGKCGITKM ESTCNQACMA FLPSSEITSE FLFYFYLYFG EKIIFSIAQG TKQQNLYSDT LKKVSMFVPP QKEQKRIVNF LDQIDSHLFE LESKKTGLDK IKKGLIQKLL TSKIRVKF
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