Gene AFE_0829 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_0829 
Symbol 
ID7134849 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand
Start bp755229 
End bp756458 
Gene Length1230 bp 
Protein Length409 aa 
Translation table11 
GC content55% 
IMG OID643529235 
Producttype I restriction-modification system, S subunit 
Protein accessionYP_002425317 
Protein GI218665757 
COG category[V] Defense mechanisms 
COG ID[COG0732] Restriction endonuclease S subunits 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.232689 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGAGGA AAACGGGAAC GATGATGGAG GTGCGGAGTG AGCGCCAAAC GGAGCCAACG 
GATCGGGGTA TGAGCGACTG GCAGAAAACT ACAGTTGGCG AGATCGCCTC CGGATTCCTC
AGCGGTGGAA CGCCATCGAC ATCGCGGGCT GATTTCTGGG AAGGAGAGAA TCCTTGGATC
ACGAGTAAAT GGCTCGGAGA CAAACTTGAG CTCACTACCG GAGAGAAATT CGTCTCCGAA
GGAGCAGTCA AAAAGACTGC AACCAAGATC GTCCCCAAGG ACAGCATCAT CTTCGCAACG
CGGGTTGGCG TCGGCAAAGT CGGCATCAAC CGGATTGACC TCGCCATCAA CCAGGACCTC
GCAGGCGTCC TGATCGACAA CGAGCGCTAC GACATCAAGT TTCTCGCATA CCAATTGGGG
ATCGACTCGA TTCAGCAATA CGTCGCGATG AACAAGCGCG GCGCGACGAT CAAAGGGATC
ACGCGAGATT GTCTCGAACA GATTCGGCTC AACCTCCCCC CACTCCCCGA GCAGAAGAAG
ATCGCGCACA TCCTTTCGAC GGTGCAGCGG GCGATCGAAG CGCAAGAGCG GATCATTCAG
ACCACCACCG AGCTGAAAAA GGCCCTCATG CACAAGCTCT TCACCGAAGG CCTCCGCAAC
GAACCCCAAA AACAAACCGA AATCGGCCCC ATCCCCGAAA GCTGGGAGGT GGTGGAGATA
GGTGACCTCG GAAAATGCAT CACTGGCTCC ACGCCAAAAA CGAAGGTTGA CTCGTTCTAC
GATCCACCTA CCGAAGACTT CATAGCCCCT GCCGACCTCG GAGCACGTCG CTACGTATAC
GATTCGGAGA AGAAGATTTC TCCCGAGGGT ATGGCCACCA TCCGGCCAAT TCCTAGGAAC
GCAGTGATGT GCGTCTGTAT CGGATCAAGC ATTGGCAAGG TAGGCATGAG CTATCGGGAA
GAGTCTGCGA CGAATCAGCA AATCAATTCG ATCATCTGCG GTGAAGGTCG CGACCCCGAA
TTCGTCTACT GCCTCCTCAG CTACCGCTCT GATTACTGGA AAAGCTTCGC CACGTTTGGC
CCAGTGCCAA TCCTCAGCAA AGGGCGCTTT TCCACAATCG GCGTTCCGAT CCCTTCGTCA
CTTGACGAGC AGCAAGCCAT CGCCAAGCCG CTGGTGAGTA CGGTCAAAGA TATTGAAGGT
TTTGTCTACG CTGACGGTCA CGTAGCGTGA
 
Protein sequence
MMRKTGTMME VRSERQTEPT DRGMSDWQKT TVGEIASGFL SGGTPSTSRA DFWEGENPWI 
TSKWLGDKLE LTTGEKFVSE GAVKKTATKI VPKDSIIFAT RVGVGKVGIN RIDLAINQDL
AGVLIDNERY DIKFLAYQLG IDSIQQYVAM NKRGATIKGI TRDCLEQIRL NLPPLPEQKK
IAHILSTVQR AIEAQERIIQ TTTELKKALM HKLFTEGLRN EPQKQTEIGP IPESWEVVEI
GDLGKCITGS TPKTKVDSFY DPPTEDFIAP ADLGARRYVY DSEKKISPEG MATIRPIPRN
AVMCVCIGSS IGKVGMSYRE ESATNQQINS IICGEGRDPE FVYCLLSYRS DYWKSFATFG
PVPILSKGRF STIGVPIPSS LDEQQAIAKP LVSTVKDIEG FVYADGHVA