Gene SYO3AOP1_1357 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSYO3AOP1_1357 
Symbol 
ID6331133 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfurihydrogenibium sp. YO3AOP1 
KingdomBacteria 
Replicon accessionNC_010730 
Strand
Start bp1393185 
End bp1394462 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content31% 
IMG OID642657640 
Productrestriction modification system DNA specificity domain 
Protein accessionYP_001931519 
Protein GI188997268 
COG category[V] Defense mechanisms 
COG ID[COG0732] Restriction endonuclease S subunits 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0971497 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGAGA GTAAAGGGTT TAAAGAAACT GAGATAGGTT TAATTCCAGA GGATTGGGAA 
GTTGTGAGAT TGGGAGAGAT ATTAGAAGAG AAGAATGAAA AAGTCAAGAA TTATGATTTT
AAAAATATTG TAGTTCTTTC AATTACAAGT AAAGATGGAC TTATTGAACA AAATAGGAAA
TTTAAGCATA GAGTTGCATC TCAGAATATA TCAGATTATA AACTTGTTAG AAAAGGTGAA
TTGGTTTATG GATTTCCTAT AAATGAGGGT GTAATAGCTT TTCTTTGGAG ATATGAAATG
GGTGCAGTTA GCCCAGCTTA CTATACATGG AAATTAAAGT ATCCAGAAAA AACTTATTAT
ATTTTTTTAG ATTACTTATT AAGAAGTCCT ATTATCTTAA ATTTATTTAA GCCGTTTATT
TCAAATACAG TCCATAGAAG AAAAATTATA AAACCTCACG ATTTTAAACA AATCCCAATC
CCCCTACCAC CACTTGAAGA GCAAAAAGCT ATTGCTGATA TTCTTTCTAC TGTCCAAAAT
GCTATAGAAA AAACAGAAAA AGTTATAAAT GCTACAAAAC AGCTTAAAAA GTCTATGATG
AAGCATCTTT TTACATATGG AGCTGTTGTA GTTGATGAGA TTGATAAAGT TAAATTAAAA
GAGTCTGAAA TCGGATTAAT TCCAGAGCAT TGGGAGGTTG TGAGGTTTGG GGATATAGTA
AATTTCAAAA TTGGTAGAAC TTCGCCAAGA AAAAATAAAG ATTATTGGAC AAATGGAAAG
TATTATTGGG TTAGTATTTC AGATATGAAA AATCGATATA TTAACAATAC ATCTGAGATG
GTTTCCGAAA AAGCACATAA AGAAATATTC AAAGAGAAAT TAACTCCAGC AGGAACGTTA
TTAATGAGTT TCAAGTTAAC AATCGGAAGA ACAGCAATAT TAAACGTGGA TGCTTACCAT
AACGAGGCTA TTATCTCAAT CTACCCAAAA GAAAATAAAG TTTTAAAAGA GTTTCTATTT
TACTATCTAC CAGCCGTTGA TTACTCCAAT TTGCAAGACA AAGCGATAAA AGGAAATACT
CTAAATACTT CTAAGCTAAA TAAAATCCCA ATCCCCCTCC CACTCCTTGA CGAACAACAA
AAAATAGCTA ACATTCTAAC AACCATAGAC CAAAAAATCC AAGCAGAAGA AAAGAAAAAA
GAAGCTCTGC AAAACCTATT TAAAACACTA CTACAACAGC TCATGACAGG AAAAATTAGA
GTTAGATATC CATCTTGA
 
Protein sequence
MKESKGFKET EIGLIPEDWE VVRLGEILEE KNEKVKNYDF KNIVVLSITS KDGLIEQNRK 
FKHRVASQNI SDYKLVRKGE LVYGFPINEG VIAFLWRYEM GAVSPAYYTW KLKYPEKTYY
IFLDYLLRSP IILNLFKPFI SNTVHRRKII KPHDFKQIPI PLPPLEEQKA IADILSTVQN
AIEKTEKVIN ATKQLKKSMM KHLFTYGAVV VDEIDKVKLK ESEIGLIPEH WEVVRFGDIV
NFKIGRTSPR KNKDYWTNGK YYWVSISDMK NRYINNTSEM VSEKAHKEIF KEKLTPAGTL
LMSFKLTIGR TAILNVDAYH NEAIISIYPK ENKVLKEFLF YYLPAVDYSN LQDKAIKGNT
LNTSKLNKIP IPLPLLDEQQ KIANILTTID QKIQAEEKKK EALQNLFKTL LQQLMTGKIR
VRYPS