| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_1357 |
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| Symbol | |
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| ID | 6331133 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | - |
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| Start bp | 1393185 |
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| End bp | 1394462 |
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| Gene Length | 1278 bp |
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| Protein Length | 425 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 642657640 |
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| Product | restriction modification system DNA specificity domain |
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| Protein accession | YP_001931519 |
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| Protein GI | 188997268 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0732] Restriction endonuclease S subunits |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.0971497 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAGAGA GTAAAGGGTT TAAAGAAACT GAGATAGGTT TAATTCCAGA GGATTGGGAA
GTTGTGAGAT TGGGAGAGAT ATTAGAAGAG AAGAATGAAA AAGTCAAGAA TTATGATTTT
AAAAATATTG TAGTTCTTTC AATTACAAGT AAAGATGGAC TTATTGAACA AAATAGGAAA
TTTAAGCATA GAGTTGCATC TCAGAATATA TCAGATTATA AACTTGTTAG AAAAGGTGAA
TTGGTTTATG GATTTCCTAT AAATGAGGGT GTAATAGCTT TTCTTTGGAG ATATGAAATG
GGTGCAGTTA GCCCAGCTTA CTATACATGG AAATTAAAGT ATCCAGAAAA AACTTATTAT
ATTTTTTTAG ATTACTTATT AAGAAGTCCT ATTATCTTAA ATTTATTTAA GCCGTTTATT
TCAAATACAG TCCATAGAAG AAAAATTATA AAACCTCACG ATTTTAAACA AATCCCAATC
CCCCTACCAC CACTTGAAGA GCAAAAAGCT ATTGCTGATA TTCTTTCTAC TGTCCAAAAT
GCTATAGAAA AAACAGAAAA AGTTATAAAT GCTACAAAAC AGCTTAAAAA GTCTATGATG
AAGCATCTTT TTACATATGG AGCTGTTGTA GTTGATGAGA TTGATAAAGT TAAATTAAAA
GAGTCTGAAA TCGGATTAAT TCCAGAGCAT TGGGAGGTTG TGAGGTTTGG GGATATAGTA
AATTTCAAAA TTGGTAGAAC TTCGCCAAGA AAAAATAAAG ATTATTGGAC AAATGGAAAG
TATTATTGGG TTAGTATTTC AGATATGAAA AATCGATATA TTAACAATAC ATCTGAGATG
GTTTCCGAAA AAGCACATAA AGAAATATTC AAAGAGAAAT TAACTCCAGC AGGAACGTTA
TTAATGAGTT TCAAGTTAAC AATCGGAAGA ACAGCAATAT TAAACGTGGA TGCTTACCAT
AACGAGGCTA TTATCTCAAT CTACCCAAAA GAAAATAAAG TTTTAAAAGA GTTTCTATTT
TACTATCTAC CAGCCGTTGA TTACTCCAAT TTGCAAGACA AAGCGATAAA AGGAAATACT
CTAAATACTT CTAAGCTAAA TAAAATCCCA ATCCCCCTCC CACTCCTTGA CGAACAACAA
AAAATAGCTA ACATTCTAAC AACCATAGAC CAAAAAATCC AAGCAGAAGA AAAGAAAAAA
GAAGCTCTGC AAAACCTATT TAAAACACTA CTACAACAGC TCATGACAGG AAAAATTAGA
GTTAGATATC CATCTTGA
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| Protein sequence | MKESKGFKET EIGLIPEDWE VVRLGEILEE KNEKVKNYDF KNIVVLSITS KDGLIEQNRK
FKHRVASQNI SDYKLVRKGE LVYGFPINEG VIAFLWRYEM GAVSPAYYTW KLKYPEKTYY
IFLDYLLRSP IILNLFKPFI SNTVHRRKII KPHDFKQIPI PLPPLEEQKA IADILSTVQN
AIEKTEKVIN ATKQLKKSMM KHLFTYGAVV VDEIDKVKLK ESEIGLIPEH WEVVRFGDIV
NFKIGRTSPR KNKDYWTNGK YYWVSISDMK NRYINNTSEM VSEKAHKEIF KEKLTPAGTL
LMSFKLTIGR TAILNVDAYH NEAIISIYPK ENKVLKEFLF YYLPAVDYSN LQDKAIKGNT
LNTSKLNKIP IPLPLLDEQQ KIANILTTID QKIQAEEKKK EALQNLFKTL LQQLMTGKIR
VRYPS
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