| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3550 |
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| Symbol | |
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| ID | 4075226 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | - |
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| Start bp | 593428 |
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| End bp | 594681 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 638005062 |
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| Product | restriction modification system DNA specificity subunit |
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| Protein accession | YP_611781 |
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| Protein GI | 99078523 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0732] Restriction endonuclease S subunits |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.257959 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.256697 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCCG TGTCGAAGGC AAGCGCTTTT CCTGCAACTG TCCAGCCCGG AATACCGAAA
CTCGGGAAGA CGCCAGAAGG GTGGTTACGC GCTCCATTGT CCCGCTTTCT TGTGGAAGTG
CGCAGGCCTA TCAAGATGGC TGACAATGAG GCCTATCGTT TGGTGACGGT CAAACGTGCT
CGTGGCGGTG TGGTTGAGCG CGGGACGCTG GATGGCAGAG AAATCTCAGT CAAGTCGCAA
TTCATCGTTG AAGGCGGTGA TTTCCTGATC TCCAAGCGTC AGATCGTTCA CGGGGCCTGC
GGACTGGTGC CTCAAGAGCT GGCCGGTTCT GTCGTTTCCA ACGAGTACTC GGTTTTGAAC
AGCAACGGAA ACATTGACCT TCAGTTCTTG AACTACCTCG CGCACACGGT GTTCTTTCAA
CAGACCTGTT TCCATTCAAG CATTGGCGTC CATGTCGAGA AAATGATTTT CAAGCTCGAC
CGTTGGCTCA AGTGGGAGTT TGATCTGCCC CCACTCTCTG AGCAACGCAA GATCGTGGAG
ATCCTGTCGA CCTGGGACCG GGCGATTGAG GTAGCCGAGG CGCAGCTGGC CAATGCCCGC
AAACAGAAAC GCGCCCTCAT GCAGTCCCTG CTGACTGGCA AACGCCGCTT CCCAGAGTTT
GAGGGACAGG AGTGGCGTGA AGTGTGGTTG GCGGACCTGG TTTCGGCCAT TCGAGGAGGA
GGAACACCAG ACAAGAGTAA CACCGCATAT TGGGGAGGAG AGATTCCTTG GGTGAGCGTC
AAGGACCTCA AATCTGATGT TCTTCAGCAG ACTAAAGACA CGATCACTCA ATCAGGCTTG
AACAGCAGTG CAGCCAATTA CTTCCCTAAG GGCACTATTG TTGTCGCTAC GAGAATGGCA
GTTGGCGCTG CCGTTCAACT GGGCAAAGGG ATGGCTATCA ACCAGGACTT GAAGGCGATC
ATCCCCGGGC CAGATGTCCG GAACGATTAT CTTTTCCACT TCATGCAAAT GGTACAGCCA
AAGTTGGAAG CTCTCGGCAC TGGAAGTACA GTCAAAGGCA TCACTTTGGG TGATCTGCAT
CGCCTTGTCA TTGGGCTTCC CGCGACCTTG GAGGAACAAG ACAAGATCGT TCAAATGCTT
GATGTCGCCA GGAAAGATAT CTCGTCTATG TGTGTAAATA TTGGAAAGCT CCGTGCCGAG
AAGAAAGCGT TGATGCAACA GCTCCTGACT GGAAAACGCC GGGTCACAGG TTGA
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| Protein sequence | MNAVSKASAF PATVQPGIPK LGKTPEGWLR APLSRFLVEV RRPIKMADNE AYRLVTVKRA
RGGVVERGTL DGREISVKSQ FIVEGGDFLI SKRQIVHGAC GLVPQELAGS VVSNEYSVLN
SNGNIDLQFL NYLAHTVFFQ QTCFHSSIGV HVEKMIFKLD RWLKWEFDLP PLSEQRKIVE
ILSTWDRAIE VAEAQLANAR KQKRALMQSL LTGKRRFPEF EGQEWREVWL ADLVSAIRGG
GTPDKSNTAY WGGEIPWVSV KDLKSDVLQQ TKDTITQSGL NSSAANYFPK GTIVVATRMA
VGAAVQLGKG MAINQDLKAI IPGPDVRNDY LFHFMQMVQP KLEALGTGST VKGITLGDLH
RLVIGLPATL EEQDKIVQML DVARKDISSM CVNIGKLRAE KKALMQQLLT GKRRVTG
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