Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_2909 |
Symbol | |
ID | 5078656 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 3370094 |
End bp | 3371416 |
Gene Length | 1323 bp |
Protein Length | 440 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640500110 |
Product | restriction modification system DNA specificity subunit |
Protein accession | YP_001184425 |
Protein GI | 146294001 |
COG category | [V] Defense mechanisms |
COG ID | [COG0732] Restriction endonuclease S subunits |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTTCTG AGAATTCGTG GCAATTGATG ACGCTGCAAG ACGCAGGCAT AAGTCTTATC GACTGCGATC ATAAAACGCC CACAGCTCAA ACTGCTGGAT TCCCGTACAT AGCAATACCG CAGTTGAAAG ATGGCCACGT TAGAGTGGAT GGAACTGAGC GGCGGATCTC AGAAACTGAC TTCATGCAGT GGACTAAAAA ATTATTACCG CAGGAAAACG ATGTCATCGT TGTCCGTCGA TGTAATTCTG GTCAAAGCGC ATACGTACCG AAGGGTGTTA AGTGGGCTAT TGGACAGAAT TTAGTTGTCC TGCGCTCCGA TGGTAAAAAA GTTTATCCTC CATTTTTAAG GTGGTTGGTG CGTAGCGATG AGTGGTGGGA ACAAGTCAGA AAGTACTTAA ATGTTGGTGC TGTCTTTGAT AGTTTGAAAT GCCGTGAAAT TCCGCTATTC GAACTTCCAA TACCGCCAAT GGTGGCGCAA ATTGAAATAG CAACTGTACT GAATTCAATT GATGCGCGGA TCGAGCTACT CCGCGAAACC AATACCACTT TAGAGGCGAT TGCGCAGGCG TTGTTTAAGT CGTGGTTTGT GGATTTTGAT CCGGTGCACG CCAACGCAGG CACACAAGCC CCAAGCCTGC CCCCAGAAAT TCAGGCCCTA TTCCCAGCCA CCTTCATCGA CTCCCCCCAA GGCCCAATTC CTGAGGGGTG GGCATTAGGC ACGATTGCAG ATGCGGTGGC GACGGTGGGT GGCGCAACCC CTGATACTAA AAATGGCGAG TTCTGGAATC CGGCAGAGGT GGCTTGGACT TCGCCCAAAG ACCTGTCAGG GCTTAATACA CCGGTGTTGC TGGACACGGA GCGGAAAGTG TCCGAAAAAG GGCTGGCCAA AATTAGCTCT GGCCTGCTAC CCGCAGGCAC TTTGCTGATG TCGTCGCGCG CCCCGATTGG CTATCTGGCG ATAGCTCAAC TTCCGCTGGC AATTAATCAA GGCTACATTG CGATTCCACC CGGAGGGCGT TTGCCACCGC TCTATATGCT GTTCTGGTGC CGCCAAAACA TGGAAATCAT CAAAAACCGC GCAAACGGCT CGACGTTTAT GGAGATTAGC AAAAAGGCCT TCCGCCCGAT TGAGCTGGTC TTGCCACCTG TGGAAGTGAT TGAGGCGTTT GTAAATGTGG CTCAACCATT ATTCGACCGT TTAGTCGAAA ATGAAAAACA AGCCCAAACC CTCGCCACTC TGCGCGATAC CCTATTGCCA CGCCTAATCT CCGGTCAATT GCGTTTGCCC GAGGCTAAAG CGGTTTTGGC AGATATTGAT TAA
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Protein sequence | MSSENSWQLM TLQDAGISLI DCDHKTPTAQ TAGFPYIAIP QLKDGHVRVD GTERRISETD FMQWTKKLLP QENDVIVVRR CNSGQSAYVP KGVKWAIGQN LVVLRSDGKK VYPPFLRWLV RSDEWWEQVR KYLNVGAVFD SLKCREIPLF ELPIPPMVAQ IEIATVLNSI DARIELLRET NTTLEAIAQA LFKSWFVDFD PVHANAGTQA PSLPPEIQAL FPATFIDSPQ GPIPEGWALG TIADAVATVG GATPDTKNGE FWNPAEVAWT SPKDLSGLNT PVLLDTERKV SEKGLAKISS GLLPAGTLLM SSRAPIGYLA IAQLPLAINQ GYIAIPPGGR LPPLYMLFWC RQNMEIIKNR ANGSTFMEIS KKAFRPIELV LPPVEVIEAF VNVAQPLFDR LVENEKQAQT LATLRDTLLP RLISGQLRLP EAKAVLADID
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