| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_2249 |
|---|
| Symbol | |
|---|
| ID | 8381405 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jonesia denitrificans DSM 20603 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013174 |
|---|
| Strand | + |
|---|
| Start bp | 2438238 |
|---|
| End bp | 2439392 |
|---|
| Gene Length | 1155 bp |
|---|
| Protein Length | 384 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 645005008 |
|---|
| Product | restriction modification system DNA specificity domain protein |
|---|
| Protein accession | YP_003162187 |
|---|
| Protein GI | 256833460 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0732] Restriction endonuclease S subunits |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.153937 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAACGCTG TGCCCCTCAA ATGTATTGCG GTGGAGAAAG GTCTCATCGG AGGCCCATTC
GGCTCCTCGC TGGTAAGTCG GGACTATGCG CGTTCGGGGG TGCCCGTGAT CCGGGGTGCC
AACATGAGTC ATGGGCGCTT CGTATCCGGA GATTTTGTCT ACGTCAGCCA GGAAAAGTTC
GAGGCCGACC TTTCCCGAAA TTCTGCGCAG GGCGGCGATC TGATCTACAC GCAGCGCGGC
ACATTAGGGC AAGTTGCACT TCTTCCACCC GGGAAGGAGC TTCACGTTAT TTCGCAGAGT
CAGATGCGGC TTCGTATCGA CGAAGCGAAG GCAGATCCGC TTTACGTCTA CTACGCATCG
ACATCCCCGC ACTTTCTATG GCAGATCGAT AATCGCGCCA TTTCGACAGG CGTTCCGCAT
ATCAATCTCG GTATCTTAGG CGACCTAGAA ATTCCCCTGC CGTCTATCGC CGAGCAGCGT
GCCATCGCCG CGACGCTCGG CGCGCTGGAC GACAAGATCG AGTCGAACCG GCGAGCAGTA
ACGATTGCTG AGCAGCTAGG AGATGCGCTG TTCGCAGCTG CCGCGAGCGA GTCACGGCTG
CTCTCGGACG TCGCGGACAT CACGATGGGA AGCTCGCCGA AGGGGGCAGA TCTCAACGAG
GACGGCGATG GCTTGCCCTT TTACCAGGGC ACGCGCGACT TCGGCGTCCG ATTCCCGTCG
CTGCGTGTCT GGACAACCGC CCCCGTCCGC ACAGCTGCAA AGAGCGACAC GCTCATGTCG
GTGCGCGCCC CGGTCGGGGA GCTGAACCGA GCGAGCGCCG ACTGCTGCAT CGGGCGTGGT
GTGGCGGCTA TCCATAGTGA TACTCACCCC AGCACGCTCT ATTACGCCAT GCGGAGCTCG
TCGAGCGCCT GGGAAAAGTT CCAAGGCGAG GGGACCGTGT TCGCCTCGGT GAATAAGACC
GATGTGCACG GTGCCGAGAT CCGTTGGGTC GGCGATGGCG CGCTTCTCGA GCTCGAGGAC
AAGCTCCGTG CGATCGATGC TCGTATCGAG TCGCTCGAGA GCGAAACCCA GCGTCTGACC
GCCCTCCGCG ACGCCCTCCT CCCCGAACTC CTCTCCGGTC GCATGCGCGT CCCCGCTGAA
GGAGTCGCAG CATGA
|
|---|
| Protein sequence | MNAVPLKCIA VEKGLIGGPF GSSLVSRDYA RSGVPVIRGA NMSHGRFVSG DFVYVSQEKF
EADLSRNSAQ GGDLIYTQRG TLGQVALLPP GKELHVISQS QMRLRIDEAK ADPLYVYYAS
TSPHFLWQID NRAISTGVPH INLGILGDLE IPLPSIAEQR AIAATLGALD DKIESNRRAV
TIAEQLGDAL FAAAASESRL LSDVADITMG SSPKGADLNE DGDGLPFYQG TRDFGVRFPS
LRVWTTAPVR TAAKSDTLMS VRAPVGELNR ASADCCIGRG VAAIHSDTHP STLYYAMRSS
SSAWEKFQGE GTVFASVNKT DVHGAEIRWV GDGALLELED KLRAIDARIE SLESETQRLT
ALRDALLPEL LSGRMRVPAE GVAA
|
|---|
| |