Gene Bcav_1496 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1496 
Symbol 
ID7861605 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp1710630 
End bp1711913 
Gene Length1284 bp 
Protein Length427 aa 
Translation table11 
GC content63% 
IMG OID643865581 
Productrestriction modification system DNA specificity domain protein 
Protein accessionYP_002881514 
Protein GI229819988 
COG category[V] Defense mechanisms 
COG ID[COG0732] Restriction endonuclease S subunits 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.136919 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAGGA TGGCGACGAT TGCCGCAACT GCGCCCCGTG GCGGCTTCCA CGATGGCGAC 
TGGGTCGAGA GCAAGGATCA GGACCCCGAT GGTGACATTC GCCTGTTGCA ACTCGCTGAC
GTCGGCGACG GCAAGTTTAA GGATAAATCG GATCGATGGA TCAACGAGGA GACATTTCGG
CGCTTGCGCT GCTCTTGGGT GCATCCTGGC GACATCCTGA TCGCACGGAT GCCAGACCCG
CTGGGACGCG CGTGCGTAGT GCCAGAAGGT CTCGGCAAGA CGATCACTGT CGTGGATGTG
GCAGTGCTCC GACCCGATCC TGATCAGGCT GATGCCGGGT ACTTGACGTA CGCAATCAAC
AGCGCAAAGA CACGTTCGGA GGTCGAGAGG CAGCAAGACG GGGCAACCCG TCAACGGATC
CCGCGCAAGC GACTCGGACG GGTGTCGATC CCCCTGCCAC CCCTGGAGGA GCAGCGGCGG
ATCGCGGACT TCCTGGACGC TGAGACCACT CAGATCGACG CGCTCATCGC CGAGCAGGAA
CGGTTGATCG GGCTCCTCAA GGAGCGTCGA GCGTCCGGGA TCCTGCAGGC GGTCACTCGT
GGTCTACGCG ACGTGGACCT GAAGCCGAGC ACGCTGACCT GGGTGGATGC GGTTCCGCTG
CACTGGACGG TCGCCAACAT TCGTCGATTC GCGGCGATGA AGACCGGTCA CACACCCTCT
CGGAGCAACC CCGAGTACTG GGTCGATACG CACATCCCCT GGTTCACGCT CGCGGACGTG
TGGCAGGTCC GCGATGGTCG GCGAACCCAT CTCGGAGAGA CCGAAAACAC GATCAGCGAC
CTAGGGCTTG CCAACTCTGC CGCCGAACTA CTTCCCGCGG GCACGGTCGT GCTGTCGCGG
ACAGCGTCTG TGGGCTTCTC TGGTGTGATG CCGCGACCGA TGGCGACGAG TCAGGACTTC
TGGAACTGGG TATGCGGCCC CGAGCTCGTG CCCGAGTACC TGATGTACCT GTTCCGAGCG
ATGCGTGGCG AGTTCAACGC CCTCATGATC GGGTCGACGC ACAAGACCAT CTACCAGCCT
GTTGCCGCGG CGATCCGCGT ACCCGTGCCG CCGCTGGAAG AGCAGCATGA AATCGTCGCC
CGCATCGACG AGCGAACCCG CAAGACCGAC GCTCTCATCA ATGAGGCGGA GCACAACATC
GCGCTGTCGA AGGAGCGCCG GGCGGCCCTG ATCACGGCCG CGGTCACCGG CCAGATCGAC
GTCACGACAG GTGGGTCCGC ATGA
 
Protein sequence
MTRMATIAAT APRGGFHDGD WVESKDQDPD GDIRLLQLAD VGDGKFKDKS DRWINEETFR 
RLRCSWVHPG DILIARMPDP LGRACVVPEG LGKTITVVDV AVLRPDPDQA DAGYLTYAIN
SAKTRSEVER QQDGATRQRI PRKRLGRVSI PLPPLEEQRR IADFLDAETT QIDALIAEQE
RLIGLLKERR ASGILQAVTR GLRDVDLKPS TLTWVDAVPL HWTVANIRRF AAMKTGHTPS
RSNPEYWVDT HIPWFTLADV WQVRDGRRTH LGETENTISD LGLANSAAEL LPAGTVVLSR
TASVGFSGVM PRPMATSQDF WNWVCGPELV PEYLMYLFRA MRGEFNALMI GSTHKTIYQP
VAAAIRVPVP PLEEQHEIVA RIDERTRKTD ALINEAEHNI ALSKERRAAL ITAAVTGQID
VTTGGSA