| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_0599 |
|---|
| Symbol | |
|---|
| ID | 7317947 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011901 |
|---|
| Strand | - |
|---|
| Start bp | 633846 |
|---|
| End bp | 635222 |
|---|
| Gene Length | 1377 bp |
|---|
| Protein Length | 458 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 643615484 |
|---|
| Product | type I restriction-modification system, S subunit |
|---|
| Protein accession | YP_002512683 |
|---|
| Protein GI | 220933784 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0732] Restriction endonuclease S subunits |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGGAAGT ACCAAGCCTA CCCAGAGTAT CGTGAAACAC GGCATGACCT GCTACCGCCG
ATACCTGTGC ACTGGATGAC GGGGCAGATC AAAAATGCCC ATGACGTTGT GCTTGGCAAG
ATGCTGCAAA GTGACGCTAA GACACCGGCA GACAGATTGT TGCCGTATCT CCGAGCTGCA
AATGTGAACT GGGGTGGTGT CGACCTCAGC ACCGTAAAAG AAATGTGGTT CTCGCCTGCC
GAGCGTAAGG CGTTGAGGCT GATGGTTGGC GACGTAGTGA TTAGCGAGGG CGGGGATGTC
GGCCGTTCCG CTGTTTGGCA GGGCGAATTG CCAGAATGCT ATTTTCAGAA TGCGATTAAT
AGGGCGCGCC CGAAGGGCGA ACACAGTAGC CGCTATCTCT ACTACTGGAT GAGCTTCATC
AAGAGTGCTG GCTATATCGA CATAATCTGC AACAAGTCTA CGATTCCTCA CTACACAGCA
GAGAAGGTCC AGGGGACGCC ATTTTTATTC CCCCCAGCCG GCGAGCAGGC AGGTATCGCC
GCCTTCCTCG ACCACGAAAC CGCCAAGATC GACCGGCTGA TCGCCAAGCA GCAGCGGCTG
ATCGAGCTGC TCAAGGAAAA GCGGCAGGCG GTGATCTCCC ATGCCGTCAC CAAGGGCCTA
AACCCCGACG CGCCGATGAA GGACTCCGGT GTGGAGTGGC TAGGTGAAGT GCCGGCGCAT
TGGAGGCTTG AGAAATTGAA GTACACAGCC ATCTTCAAGG GTGGTGGCAC ACCATCCAAA
GATTCACCCG AATATTGGGG TGGTGATATT CCGTGGGTTT CCCCAAAGGA CATGAAGTCT
CGATATGTTG CCGATTCGCA GGACAAGATC ACGGTTGAGG CTATTGCAGC GAGTTCAACT
AGCCTGATTG GGCCTGGACA GGTTCTGGTT GTCGTCCGGT CAGGAATTCT TCAAAGAACT
ATTCCGGTTG CCGTGAATCT TGTTGAGGTC ACACTTAACC AGGACATGAA GGCAATAGAT
TTTAGGGATG AAACCCGTTC TGAGTTTTTC TCATATTTCG TTGAAGGGCA TGAGGATAAC
CTGCTGCTTG AATGGCGAAA GCAAGGTGCG ACCGTAGAAA GCATAGAGCA GGAGTATTTG
GGGAATACTA TGGTGCCGAT GCCGCCGCCC TCGGAAATGA TGGAGATTCT TCAGTTTCTA
AATGGGCAAT TGGAGAAGTA CCGGCTTCTT ACGGAAAAGG CAACGCGCGC AATTGAGTTA
CTTAGGGAGC ACCGAACCGC GCTTATATCA GCTGCCGTCA CCGGAAAGAT CGACGTCCGT
GGCTGGCAAA AACCGAACAC CGAACCACAA GAAGCGGCAG AAGCCGCCAG CGCCTAA
|
|---|
| Protein sequence | MGKYQAYPEY RETRHDLLPP IPVHWMTGQI KNAHDVVLGK MLQSDAKTPA DRLLPYLRAA
NVNWGGVDLS TVKEMWFSPA ERKALRLMVG DVVISEGGDV GRSAVWQGEL PECYFQNAIN
RARPKGEHSS RYLYYWMSFI KSAGYIDIIC NKSTIPHYTA EKVQGTPFLF PPAGEQAGIA
AFLDHETAKI DRLIAKQQRL IELLKEKRQA VISHAVTKGL NPDAPMKDSG VEWLGEVPAH
WRLEKLKYTA IFKGGGTPSK DSPEYWGGDI PWVSPKDMKS RYVADSQDKI TVEAIAASST
SLIGPGQVLV VVRSGILQRT IPVAVNLVEV TLNQDMKAID FRDETRSEFF SYFVEGHEDN
LLLEWRKQGA TVESIEQEYL GNTMVPMPPP SEMMEILQFL NGQLEKYRLL TEKATRAIEL
LREHRTALIS AAVTGKIDVR GWQKPNTEPQ EAAEAASA
|
|---|
| |