Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_3525 |
Symbol | |
ID | 5078718 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 4098979 |
End bp | 4100241 |
Gene Length | 1263 bp |
Protein Length | 420 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640500728 |
Product | restriction modification system DNA specificity subunit |
Protein accession | YP_001185033 |
Protein GI | 146294609 |
COG category | [V] Defense mechanisms |
COG ID | [COG0732] Restriction endonuclease S subunits |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGGCTA ATTATATTAC GACGATTGGC GGCATAGCAG AAATTTATGA TGGCCCGCAT GCAACACCAA AGAAGTTGGA GCAAGGTCCA TATTTTTTGA GTATCTCAAG TTTAGATAAA GGTCGATTAG AACTAAACAA ATCGGCGTTT CTAAGCGAAG ATGATTTTAA AAAATGGACT AAAAGAGTCA CGCCCCAAGA AGGTGATCTT CTTTTTTCTT ACGAAACCAG GCTTGGTGAG GCGGCGCTTA TGCCTGCTGG AGTGCGGGCC TGCTTAGGGA GACGCATGGG GCTGCTTAGA CTCAATAAAG CAAAAGTTAC ACCTGAGTAT GCTTTATACG CATATCTGTC ACCTGCTTTT CAGCAAACGA TTAAAGCAAA CACGCTTACG GGAGCAACGG TAGATCGTAT AGCGTTGAAC GATCTGCCTA ACTTTCCTAT TCGTATTCCT CCTATTGAGG AGCAGAAAAA AGTTGCAAAG CTTTTAAGCG GTATAGACAA AAAAATCGAA CTAAACAACC ACATCAATGC CGAGCTGGAA GCCATGGCCA AAACCCTGTA CGACTACTGG TTTGTACAAT TTGACTTCCC CGACGACTCG CCACAACGCA AAGGCAAACC CTACAAATCC TCTGGCGGCA AAATGGTCTA CAACCCCATC CTAAAACGGG AGATACCGGA GGGTTGGGGA GTTAAAAAAC TATCTGAAAT TGCGATGACA GGTTCAGGCG GAACACCGCT GAGCTCTAAT CCTGAATTCT ATGAAAATGG CACCATTCCG TGGATTAATA GTGGTGAATT AAATTCACAA TTCATTGTTT CAACATCTAA TTTCATAACC GAACTAGGGT TGGAAAAATC TAGCGCGAAA TTATGCCCTA AAAATACGAT CTTAATGGCT ATGTATGGAG CGACTGCGGG TAAAGTTAGT TTTATTGATT TTCCTGCTAC AACCAATCAG GCAATTTGCA CAATTAATCC GTTCGATCAA GAAATGAATG TTTACCTTAA GTTCACACTT GAAAGACTCT ACCAATACCT GATTAATTTA AGTTCAGGAT CTGCAAGAGA TAATTTGTCA CAGGACAAAA TTAAAAGCCT TGATGTAGTT ATCCCTGCAC CTAGTGCATT GACGCAGTTC CATGAATTTA CGAAGTCAAA AATGGAGCTT ATTTTGACAA ATCTAAAAGA AAATCAAGAG CTCACCTCTC TCCGCGACTG GCTCCTTCCC ATGCTAATGA ACGGTCAGGT AACGGTAAAA TGA
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Protein sequence | MKANYITTIG GIAEIYDGPH ATPKKLEQGP YFLSISSLDK GRLELNKSAF LSEDDFKKWT KRVTPQEGDL LFSYETRLGE AALMPAGVRA CLGRRMGLLR LNKAKVTPEY ALYAYLSPAF QQTIKANTLT GATVDRIALN DLPNFPIRIP PIEEQKKVAK LLSGIDKKIE LNNHINAELE AMAKTLYDYW FVQFDFPDDS PQRKGKPYKS SGGKMVYNPI LKREIPEGWG VKKLSEIAMT GSGGTPLSSN PEFYENGTIP WINSGELNSQ FIVSTSNFIT ELGLEKSSAK LCPKNTILMA MYGATAGKVS FIDFPATTNQ AICTINPFDQ EMNVYLKFTL ERLYQYLINL SSGSARDNLS QDKIKSLDVV IPAPSALTQF HEFTKSKMEL ILTNLKENQE LTSLRDWLLP MLMNGQVTVK
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