| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0501 |
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| Symbol | |
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| ID | 6114735 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 711514 |
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| End bp | 713352 |
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| Gene Length | 1839 bp |
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| Protein Length | 612 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 641631988 |
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| Product | restriction modification system DNA specificity subunit |
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| Protein accession | YP_001758893 |
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| Protein GI | 170724867 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0732] Restriction endonuclease S subunits |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.435558 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGAGC ACGCATTAAA TAAGGCTGTG GAACTAACGA CAGAGTTAAC CGCAGAGCAA
TTAATCACTG AGAACCTTGA TATCTGGACG ACCGCCATCG AGCAAAAGTC AGCGTCAGGC
CGTGGTTCAT CAAAGAAATT TTCACTGCAT GGCATTAAAA AGTTGCGTGA ACTGATCTTG
GAACTCGCCG TTCGCGGTAA GTTAGTACCA CAGGCCAGCC GCGAGGCGAG AAATAGTGCT
AGCTATGAAC CAGCATCAAT ATTGCTTGAG CGCATTGCTA GCGAAAAAGC ACAATTGGTG
AAAGACAAGA AGATTAAAAA GCCTAAAGCT TTGCCTGTAA TTAGCGAGGA TGAAAAGCCG
TTTGAGCTGC CCAAGGGGTG GGAGTGGACG AGGCTTCAAG ATATTGGACA TGACCTTGGT
CAAAAGACAC CTGATTGCGA ATTTACATAT ATAGATGTTG GTGCAATCAA TAAAGAACTA
GGCTTTGTTG AAGAGCCAAG TATCTTAAAA GCTTCTGACG CACCATCTCG GGCACGAAAA
CTTGTAAAAA GAAATACCGT TATTTATTCG ACTGTACGAC CATATTTACT CAATATTGCG
GTCATTGGTA ACGATTTATC TCCAGAACCT ATTGCGAGTA CAGCCTTTGC AATCATCCAC
CCTTTATTGG GAATGAATAG CTCATATATT TATCGTTATT TGCGTTCACC TTGTTTCATT
AATTATGTCG AAAGCGTTCA GACAGGTATT GCTTACCCAG CAATTAATGA TAAACAATTT
TTCAATGGCA TTATTGCAAT TCCTCCAACT GAAGAGCAAC ACCGCATCGT CGCTAAAGTT
GATGAATTGA TGATCTTGTG TGATGCCCTA GAAGCGCAAA CAGAAGCTAG CAAGTCAGCA
CACCAAACCT TAGTTGAAAT CTTGCTAGGG GCATTACTGC TTCCTTCTGC TGATGCTAAC
AGCCCTGAGC CGGTAGAAAG CCCTGAGCTG TACTTTATAG AGAGCTGGCA ACGTGTTGCC
GAGCATTTCG ATACGCTATT CACCACCAGC GCCAGCATCG ACACGCTAAA GCAAACCATC
CTGCAACTCG CCGTCATGGG CAAGCTGGTA CCACAGGATA CTAATGATGA ACCAGCCGCT
AAGCTACTAG AGCGTATCGC CGCAGAAAAA GCGCAATTAA TAGCTGACAA GAAAATCAAA
AAGCAGAAAC CACTGCCAGC CATCACCGAT GAAGAAAAGC CGTTTGAACT ACCGAATGGA
TGGGAGTGGG CAAGGTTTGT AGATATAGCT TATCTTATTA CTGATGGTGC TCACCACACT
CCAAAGTACA TTGAGCATGG CATTCCATTT TTATCAGTTA AAGATATGAG TGATGGCAAA
TTAAATTTTG GTGATACTAG GTTTATTTCA GAGGAACAAC ATAAAGATTT GATTAAGAGA
TGCAATCCTC AAAAAGGTGA CCTTTTACTT ACTAAGATTG GGACAACAGG TGTTCCTGTC
TTAATTAATA CTGATAAAGA ATTTAGTATC TTCGTTAGCG TGGCTTTGAT TAAATTTTCA
ACCAATGAAA TTGATGGGAA CTTCCTTTCT CTTTTGGTTA AATCCCCATT AGTGAAAAAG
CAATCTCAAG AGGGTACCCA AGGTGTAGGT AATAAGAATT TAGTTCTCAA AACTATTTCA
AATTTTCCAT TATTATTTCC CCCTTTAAAT GAACAACACC GCATCGTTGC TAAAGTTGAT
GAGCTAATGG CGCTTTGCGA CCAACTCAAA GCCCGCTTAA GCGACGCCCA AACAATCCAA
CTCCACCTCA CCGACGCCAT CGTCGAACAG GCTATATAA
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| Protein sequence | MAEHALNKAV ELTTELTAEQ LITENLDIWT TAIEQKSASG RGSSKKFSLH GIKKLRELIL
ELAVRGKLVP QASREARNSA SYEPASILLE RIASEKAQLV KDKKIKKPKA LPVISEDEKP
FELPKGWEWT RLQDIGHDLG QKTPDCEFTY IDVGAINKEL GFVEEPSILK ASDAPSRARK
LVKRNTVIYS TVRPYLLNIA VIGNDLSPEP IASTAFAIIH PLLGMNSSYI YRYLRSPCFI
NYVESVQTGI AYPAINDKQF FNGIIAIPPT EEQHRIVAKV DELMILCDAL EAQTEASKSA
HQTLVEILLG ALLLPSADAN SPEPVESPEL YFIESWQRVA EHFDTLFTTS ASIDTLKQTI
LQLAVMGKLV PQDTNDEPAA KLLERIAAEK AQLIADKKIK KQKPLPAITD EEKPFELPNG
WEWARFVDIA YLITDGAHHT PKYIEHGIPF LSVKDMSDGK LNFGDTRFIS EEQHKDLIKR
CNPQKGDLLL TKIGTTGVPV LINTDKEFSI FVSVALIKFS TNEIDGNFLS LLVKSPLVKK
QSQEGTQGVG NKNLVLKTIS NFPLLFPPLN EQHRIVAKVD ELMALCDQLK ARLSDAQTIQ
LHLTDAIVEQ AI
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