Gene Veis_3010 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_3010 
Symbol 
ID4690733 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp3357602 
End bp3359251 
Gene Length1650 bp 
Protein Length549 aa 
Translation table11 
GC content53% 
IMG OID639850768 
Productrestriction modification system DNA specificity subunit 
Protein accessionYP_997761 
Protein GI121609954 
COG category[V] Defense mechanisms 
COG ID[COG0732] Restriction endonuclease S subunits 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.340841 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGAAT GCCCGTTGAT TGATATTCGA CCGGATCATT GGCGCATAGT CGAAGCAATC 
TTGAAAAAGC ATGTTCCCCG GCACATGGTG TGGGCATTTG GCTCACGTGC CAAGTGGTCG
GCCAAAGCCT ATTCGGATCT GGATTTGGCC ATCATCACGG AAAAGGCGTT GCCTTTAGCG
GTGAGCGCCA GTTTGAGTGA TGATTTTTCT GAGTCCGATT TGCCCTACAA GGTGGATGTG
GTGGATTGGG CAACGACGAG TGCAGCGTTT CGGGAGATTA TTGAGCGGGA TAGGGTGGTG
GTGTGGGAGG GGCGTTCATC GACGAAAGGG GCGGCAGGTG AATGGGGCGA AATTCCGTTC
TCGGAAGCAG TGCTCCTGAA TCCAGCGACA CCATTGGTAA AAGGTGTCAT TTATCCGTTC
GTCGAAATGT CTGCGATAGC GGTAGGCACG AGAGATGTGA AATGCTCGGA GTATCGAAAC
TTCTCTGGGG GAGGCTCACG CTTCCAAGAC CGCGATACTT TGATGGCCAG AATCACACCA
TGCCTTGAAA ATGGCAAGCT GGCACGGTTT CAAGCGCCTG AAGGCGAACC TATTGGACAC
GGCTCGACCG AGTTTATTGT AATTCGTGGA AAACCAAATG TCACGGATAA CGACTACGCT
TATTATTTGG CGATTTCTTC AGAAGTTCGT AAATTCGCCA TTTCCCAGAT GACGGGAACG
TCGGGGCGGC AACGCGTGCC CACTGATGCC CTTGGCAAAA TCTCCGTTCT TCTTCCACCC
CTCACCGAGC AAAAAGCCAT TGCCCACATC CTGGGCACGC TGGACGACAA AATCGCGTTG
AACCGGCGGA TGAACGCCAC GCTGGAAGCA ATCGCCCAGG TGCTATTCAA GTCGTGGTTT
GTTGATTTCG ACCCCGTGCG TGCCAAAATG GAAGGCCGCT GGCAGCGCGA CCAGTCACTG
CCTGGATTAC CGGCAGATCT TTACGATCTA TTTCCCGAAC GGCTAGTTGC TTCTGAGTTG
GGGGAGATCC CGGAAGGGTG GGCGATTGGC AGTTTTTCTG AAGCTGTTGA AATTATTGGC
GGCGGCACGC CTAAAACTTC GGTTAGTGAG TACTGGGGTG GCGACATTCC GTGGTTTTCT
GTCGTGGACA CGCCCCCCTC AAGTGATGTG TTTGTTGTTC AAACTGAAAA ATCGATTACC
CGGTCTGGGT TGAATGGAAG TTCTGCACGA ATGATTGCCA AGGGCACCAC CATCATTTCT
GCGCGCGGCA CTGTTGGTAA TTTGGGGATT GCTGGGCGCG ACATGACATT CAATCAATCG
TGCTATGCGT TGCGGGGTAA GAACGGATCT GGTGATTATT TCGTATTTCT TTCTGCGCAG
TGCATGGTTG AACAGCTTAA GGTGATGGCA CACGGTTCCG TGTTCTCGAC CATTACACGC
CAGACATTCG ATGCCGTACG TTTCGTGCTA CCGCCTGAAC CTGTGCTTCA GCAATTCGAG
CGAACTGCCA CCAGCGTGTT CGATGCAATT TTCGGTAACG GCAACGATTC CCGCTCCCTC
GCCAGACTGC GCGGCACCCT GCTACCCAAG CTAATTTCAG GTGAACTGCG CATACAAGAT
GCCGAGCGCA TCGTCGGAGC GGCGGTATGA
 
Protein sequence
MKECPLIDIR PDHWRIVEAI LKKHVPRHMV WAFGSRAKWS AKAYSDLDLA IITEKALPLA 
VSASLSDDFS ESDLPYKVDV VDWATTSAAF REIIERDRVV VWEGRSSTKG AAGEWGEIPF
SEAVLLNPAT PLVKGVIYPF VEMSAIAVGT RDVKCSEYRN FSGGGSRFQD RDTLMARITP
CLENGKLARF QAPEGEPIGH GSTEFIVIRG KPNVTDNDYA YYLAISSEVR KFAISQMTGT
SGRQRVPTDA LGKISVLLPP LTEQKAIAHI LGTLDDKIAL NRRMNATLEA IAQVLFKSWF
VDFDPVRAKM EGRWQRDQSL PGLPADLYDL FPERLVASEL GEIPEGWAIG SFSEAVEIIG
GGTPKTSVSE YWGGDIPWFS VVDTPPSSDV FVVQTEKSIT RSGLNGSSAR MIAKGTTIIS
ARGTVGNLGI AGRDMTFNQS CYALRGKNGS GDYFVFLSAQ CMVEQLKVMA HGSVFSTITR
QTFDAVRFVL PPEPVLQQFE RTATSVFDAI FGNGNDSRSL ARLRGTLLPK LISGELRIQD
AERIVGAAV