Gene Paes_0308 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_0308 
Symbol 
ID6460393 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp327347 
End bp328717 
Gene Length1371 bp 
Protein Length456 aa 
Translation table11 
GC content48% 
IMG OID642724304 
Productrestriction modification system DNA specificity domain 
Protein accessionYP_002015012 
Protein GI194333152 
COG category[V] Defense mechanisms 
COG ID[COG0732] Restriction endonuclease S subunits 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0548885 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.428283 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAATT TTCAAAGGGG GGCGGACATT CCTGTCCGCC ATTCAGAGGG CAATGGCTAT 
CCGGAATATA ATGGCGGGTT GGAAAACCCG CCCTCCGTTG AAAGAGATTC TGAAAGTGGG
CGGGATATGA GGGATTGGAA GAAAACTACA GTTGGTAAGG TTTCCACTGG ATTTCTCAGT
GGCGGAACTC CAAGTACCTC GCGGGCTGAT TACTGGAAAG GAGAGATTCC TTGGATTACG
AGTAAATGGC TCGGTGACAA ACTGGAACTC ACAACTGGGG AGAAATTTGT TTCCGAAGAA
GCGATCAAAA ACACTGCGAC CAAAATCGTC CCAAAAGACA GTATCATTTT TGCAACTCGG
GTTGGTGTTG GAAAAGTCGG CATCAACCGG ATCGACCTCG CCATCAATCA GGATCTCGCA
GGCGTTCTGA TCGATAACGA GAACTACGAC ATCAAGTTTC TTGCATACCA GTTAGGGATC
GACTCGATTC AACAATACGT CGCGATGAAT AAGCGAGGAG CGACAATCAA AGGGATCACG
CGAGACTGTC TTGAACAGAT TCAGCTCAAC ATTCCCCCAC TCCCCGAACA GAAGAAAATC
GCGCACATCC TTTCGACGGT GCAACGGGCG ATCGAAGCGC AGGAGCGGAT CATTCAGACC
ACAACCGAAC TGAAAAAGGC CCTCATGCAC AAGCTTTTCA CAGAAGGGCT TCGCAACGAA
CCGCAGAAAG AAACCGAGAT TGGGTTGGTG CCGGAGAGTT GGGAGGTCTG CAAAGTTGGA
GATGTTGCGA AGATCCAAAG TGGTGGAACA CCCTCGCGTG ATGTGCCTGA GAATTGGCGT
GATGGAACCA TTCCGTGGGT CAAAACAGGA GAGATCAACT ACTGTGTGAT AAAAGACACT
GAAGAGAAGA TTACCCCAAC AGGATTAGCT AATTCTGCCG CTCAGCTATT TCCTACAGGA
ACCTTATTAA TGGCAATGTA TGGCCAAGGC ATCACTCGTG GGAAAGTAGG ATTACTCGGC
ATTGAGGCTG CCACGAATCA AGCGTGTGCG TCCATCATTC CTATTGACCA AGATCAAATT
TCTTCGGTCT TCCTTTATTA TTTTTTCGAA TTTCAATACG AAAATCTGCG ACAGCTTGGA
CATGGCGCAA ACCAAAGGAA TATGAGTGCT GGATTGATTC GTGGTTTTCC GCTCTCGTTC
CCGAAATTTG AAGAACAGGC GGCTATGATA GCCGCGTTTG AATCACTTGA TAAGAAACGA
TATTTCCATG AGCGAAAACG AACCCAGTTT CAAGGCCTAT TTCGTACACT CCTTCACGAA
CTGATGAACG CGAAGACTCG AGTGCATCAA CTCAACAGCC CTGCAGCATA A
 
Protein sequence
MSNFQRGADI PVRHSEGNGY PEYNGGLENP PSVERDSESG RDMRDWKKTT VGKVSTGFLS 
GGTPSTSRAD YWKGEIPWIT SKWLGDKLEL TTGEKFVSEE AIKNTATKIV PKDSIIFATR
VGVGKVGINR IDLAINQDLA GVLIDNENYD IKFLAYQLGI DSIQQYVAMN KRGATIKGIT
RDCLEQIQLN IPPLPEQKKI AHILSTVQRA IEAQERIIQT TTELKKALMH KLFTEGLRNE
PQKETEIGLV PESWEVCKVG DVAKIQSGGT PSRDVPENWR DGTIPWVKTG EINYCVIKDT
EEKITPTGLA NSAAQLFPTG TLLMAMYGQG ITRGKVGLLG IEAATNQACA SIIPIDQDQI
SSVFLYYFFE FQYENLRQLG HGANQRNMSA GLIRGFPLSF PKFEEQAAMI AAFESLDKKR
YFHERKRTQF QGLFRTLLHE LMNAKTRVHQ LNSPAA