Gene Veis_3129 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_3129 
Symbol 
ID4690831 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp3477387 
End bp3478637 
Gene Length1251 bp 
Protein Length416 aa 
Translation table11 
GC content59% 
IMG OID639850887 
Productrestriction modification system DNA specificity subunit 
Protein accessionYP_997878 
Protein GI121610071 
COG category[V] Defense mechanisms 
COG ID[COG0732] Restriction endonuclease S subunits 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.343622 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0250234 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGTCTG AGTGGGCGAC TGCGACGATT GGCGATGTTG CCAAGATAAA GCACGGCTTC 
GCTTTCAAGG GCGAGTTTTT CACGGATGAA GTGACGCCGA ATGTCTTGGT CACGCCCGGA
AACTTTGCGA TCGGCGGCGG CTTCCAGATT GGCAAGCCTA AGTATTACGC CGGGCCGCTA
CCTGATGACT ATGCGCTGAC GGAAGGTGAA GTTGTCGTCA CGATGACGGA CTTGAGCAAG
GCATCCGACA CGCTTGGTTA TGCGGCAAAG GTTCCAAGCG TACCCGGCGT GACTTACTGG
CACAACCAGC GAATCGGCTT GCTGCAAGTC ACGGACAAGC AGCGCGCTTG CAAAGATTGG
CTGCACTACC TGATGCGAAC ACACGAATAC CGCGCATGGG TTGTCGGTTC TGCATCAGGC
ACAACGGTCA AGCACACATC GCCGTCACGA ATCGAGAGCT TTTCGTTCAA GCTCCCGCCG
CTCGAAGAAC AACGCGCCAT TGCCGAAACA CTCGGCTCAC TCGACGACCG CATCGACAAT
CTACGCCAGA CCAACGCCAC GCTGGAAGCC ATCGCTGCCG CGCTATTCAA GTCTTGGTTC
GTGGACTTTG ACGGCGTTTC CGCCACGGAT ATGCGGGAAT CGGAACTGGG CTTGATTCCG
AAGGGGTGGC GGATTGGCTC CTTTGACGAG GCCATCGAAA TCCTCGGTGG CGGCACACCG
AAAACCTCCA TCGCTGACTA CTGGAGCGGC GATGTGCCGT GGTTTTCCGT TGTGGACGCA
CCCGGCAGTG GCCAAGTGTT CGTGCTGGAT ACCGAAAAGA AAATCACCGC GCTCGGCTTG
CAAAACTGCT CGGCCAAGCT GCTGCCGGAA ATGACCACCA TCATTTCGGC ACGTGGCACA
GTGGGAAAGG TGGCGATGAC CGGCGTGCCG ATGGCGATGA ATCAGTCGTG CTACGCGCTG
CGTCCCAGGC AGCAAAGCGG CGAAGCCTTC GTCTATTTCT CAACGCTGCG CTTCGTCGAG
CATCTGCAAC GCATCGCCCA CGGTGCGGTG TTCGACACCA TCACACGTGA CAGCTTCAAG
CAGGTCACGA CTTGCCTGCC GCCCGATGAA GTTATCGCCG GGTTTGCCGA AATTGCGAAC
CCGCTGCTCG AACGCATCCG CATCAACGGA CAGCAAGCTG CCATCCTCGC CGCCCTGCGC
GACGCGCTTC TGCCGCGCCT TATCTCCGGC CAACTTCGGG TGGCGCAATG A
 
Protein sequence
MASEWATATI GDVAKIKHGF AFKGEFFTDE VTPNVLVTPG NFAIGGGFQI GKPKYYAGPL 
PDDYALTEGE VVVTMTDLSK ASDTLGYAAK VPSVPGVTYW HNQRIGLLQV TDKQRACKDW
LHYLMRTHEY RAWVVGSASG TTVKHTSPSR IESFSFKLPP LEEQRAIAET LGSLDDRIDN
LRQTNATLEA IAAALFKSWF VDFDGVSATD MRESELGLIP KGWRIGSFDE AIEILGGGTP
KTSIADYWSG DVPWFSVVDA PGSGQVFVLD TEKKITALGL QNCSAKLLPE MTTIISARGT
VGKVAMTGVP MAMNQSCYAL RPRQQSGEAF VYFSTLRFVE HLQRIAHGAV FDTITRDSFK
QVTTCLPPDE VIAGFAEIAN PLLERIRING QQAAILAALR DALLPRLISG QLRVAQ