| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A4880 |
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| Symbol | |
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| ID | 6482757 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | - |
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| Start bp | 4749600 |
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| End bp | 4751315 |
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| Gene Length | 1716 bp |
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| Protein Length | 571 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 642740091 |
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| Product | putative type I restriction-modification system S subunit |
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| Protein accession | YP_002043768 |
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| Protein GI | 194442247 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0732] Restriction endonuclease S subunits |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 66 |
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| Fosmid unclonability p-value | 0.960431 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGTGG AAAAACTGAT TGTTGACCAT ATCGACACCT GGACCACGGC GCTGCAAACC
CGTTCCACGG CGGGGCGCGG TAGCTCGGGT AAGATTGACC TGTACGGCAT TAAGAAGCTG
CGCGAGCTGA TTCTGGAGCT GGCGGTGCGC GGCAAGCTGG TGCCGCAGGA TCCGAACGAT
GAACCGGCGT CGGTGCTGCT GAAACGCATT GCGGCGGAAA AAGCCGAGCT GGTGAAGCAG
GGGAAAATTA AAAAGCAAAA GCCGCTGCCG GAGATTAGCG AGGAGGAGAA ACCGTTTGAG
CTGCCGATGG GGTGGGAATG GACGAGGTTA GGATCTATTT CAAACTATGG TTTTTGTGAT
AAAGCAGAAC CTGAAGACGT AACACCTGAA ACATGGATCC TTGAATTAGA GGATATAGAG
AAAGTCACAT CAAAGCTTAT CAATAAGGTA ACTTTTGCAG AAAGACCGTT TAAAAGCTCT
AAGAATCGAT TCTCACAAGG TGATGTACTT TATGGAAAAT TACGTCCGTA CCTGGATAAA
GTGATCGTTG CTAATGAACC GGGTGTATGT ACTACTGAAA TTATCCCAAT AACAAGCTAT
GGTAATATTT ACCCAGAGTT CTTACGTCTA TTGCTGAAAG CACCAAATTT CATTATTTAT
GCAAATAGCT CTACACATGG AATGAACTTG CCAAGGCTTG GTACAGAAAA AGCTCAGCAG
GCTGTCATCG AATTAGCTCC TATCCAGGAG CAACTGCGAA TTGTTTCACG TGTTGATAAA
CTCATGTCCC TCTGCGATCA ACTGGAACAG CACTCCCTGA CCAGTCTGGA TGCCCATCAA
CAGCTGGTAG AAACCCTGCT AACCACGCTG ACCGACAGCC AGAACGCCGA TGAACTGGCC
GAAAACTGGG CGCGTATCAG CGAGCATTTC GACACGCTGT TTACCACCGA AGCCAGTATT
GCCGCCTTAA AACAGACCAT TCTGCAACTG GCGGTGATGG GCAAACTAGT GCCGCAGGAT
CCGAACGATG AACCGGCCTC TGAACTGCTC AAACGTATTG CGCAGGAAAA AGCGCAGTTG
GTAAAAGACG GGAAAATGAA AAAACAAAAA CCGTTGCCAC CGATTAGCGA TGAGGAAAAA
CCGTTTGAAT TGCCAATAGG TTGGGAATGG TGTCGTTTAG GTGAATGCAT CAACCTAATT
TCTGGACAGC ACCTGAAACC AGATGAATAT GAAGAAGAGT GCCATGGTGA AATGCTTCCT
TATATTACTG GACCGGCCGA ATTTGGACTA ATCAGCCCAA CTTATTCCAA ATATACAAAT
GAAAAAAGGG CTATTGCTGC TAAGGGCGAC ATTCTAATTA CATGTAAAGG CGCAGGGCTT
GGAAAGCTTA ACGTCGCTGA TACCAATATA GCCATTAGTC GTCAACTAAT GGCTATTAAT
GTCATTAGGA TGAATTCAGA ATATCTTAAA ATTATACTTG ATAGCATGTA TGGTTATTTT
CAATCTAAAG GGGTTGGTAT AGCTATACCT GGAATATCAC GAGAAGATGT GATGGAGCCA
TTAATTATGC TTCCTCCATT CGAAGAACAA AAAAGGATAA TGGAAAACTT ATATAAATTA
AATTTTTTTA TCGAAGATAT AAAATTCAGG ATTAAATCCG CCCAACAAAC CCAGCTCCAC
CTGGCCGACG CCCTTACCGA CGCCGCCATC AATTAA
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| Protein sequence | MAVEKLIVDH IDTWTTALQT RSTAGRGSSG KIDLYGIKKL RELILELAVR GKLVPQDPND
EPASVLLKRI AAEKAELVKQ GKIKKQKPLP EISEEEKPFE LPMGWEWTRL GSISNYGFCD
KAEPEDVTPE TWILELEDIE KVTSKLINKV TFAERPFKSS KNRFSQGDVL YGKLRPYLDK
VIVANEPGVC TTEIIPITSY GNIYPEFLRL LLKAPNFIIY ANSSTHGMNL PRLGTEKAQQ
AVIELAPIQE QLRIVSRVDK LMSLCDQLEQ HSLTSLDAHQ QLVETLLTTL TDSQNADELA
ENWARISEHF DTLFTTEASI AALKQTILQL AVMGKLVPQD PNDEPASELL KRIAQEKAQL
VKDGKMKKQK PLPPISDEEK PFELPIGWEW CRLGECINLI SGQHLKPDEY EEECHGEMLP
YITGPAEFGL ISPTYSKYTN EKRAIAAKGD ILITCKGAGL GKLNVADTNI AISRQLMAIN
VIRMNSEYLK IILDSMYGYF QSKGVGIAIP GISREDVMEP LIMLPPFEEQ KRIMENLYKL
NFFIEDIKFR IKSAQQTQLH LADALTDAAI N
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