Gene AFE_1576 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_1576 
Symbol 
ID7134578 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand
Start bp1368452 
End bp1369651 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content49% 
IMG OID643529964 
Producttype I restriction-modification system, S subunit 
Protein accessionYP_002426003 
Protein GI218666566 
COG category[V] Defense mechanisms 
COG ID[COG0732] Restriction endonuclease S subunits 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.200835 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGGGATG GGTGGCACGT CGAGCCACTG AGCAAAGTAT GTCAGCTTAT AAATCGCGGC 
ATATCTCCGG TATATCTTGA TGACGGCGGA ACGGCTGTAT TAAATCAGAA GTGTATTCGC
GATCACTCAA TTAACTATGA CCTTGGACGA CGCCACTGTG TTACCACCAA ACGAGTGTCG
GCTGACAAAC TGGTCCGTGT GGGGGATGTG CTCGTTAACT CTACAGGTAC CGGAACATTA
GGGCGTGTTG CGCAAGTCCG TGATGAGCCT CATGAACCGA CGACCGTAGA CTCTCATGTT
ACTATTGTTC GGCCCAAAGA TGGGCTCTTC TTCCCTGAAT TTTTTGGTTA CGCGCTAATC
GCTATAGAAA ATCAGATTCA GGAGGGCGGT GAAGGTTGTG GAGGCCAGAC CGAGTTAGCA
CGTTCCAAGC TAGCAAACGA TTACCACGTC AGCTTCCCTA CTTCCATTCC TGAACAGCGC
CGCATAGTCG CCATCCTCGA CGAAGCCTTT GAAGGCATAG CAACCGCAAA AGCGAACGCC
GAGAAGAATC TTCAGAATGC CCGTGAGGTC TTTGAGAGCC ATCTGAATGC GGTGTTTTCG
CAGCGAGGTG AGGGATGGGT GGAGAAGCGG TTGGATGAAG TCGGTAAGAC TCAAACCGGT
TCTACACCAA AGGCATCTGA GCCCGAAAAC CTGGGTAAAC ATATTCCCTT CGTGAAACCA
GGTGACTTTA AGCCTGATGG CTCCATTACC TACGATAACG AAGGGTTAAG CCAGAATGGA
GCGGCAAAAG CACGATTGGT TATGGCACCA TCAGCAATCA TGGTATGTAT TGGAGCAACC
ATTGGCAAAT CCGCGTATGC AAACAGGATA ATTGCAACTA ATCAACAGAT TAACTCATTA
ACTCCAGCGA CTGGAATATC TGCCAAAATG GTCTACTACC AGATGATCAC TGTAGACTTC
CAGCGTCGCG TTCATGAGAA TGCTGGACAA GCGACCCTTC CCATTATCAA CAAGTCGAAG
TGGAGTTCCC TTTCCATATT CATTCCCCCG ACCGTTGATG AGCAGAACCA TATTGTTGCT
CGTCTCGATA ATTTACATGA AGAAACCCAA CGCCTCGAAT CCCTTTACCA GAAAAAACTC
ATCGCCCTCG ACGAACTAAA ACAATCCCTC CTACACCAAG CCTTTAACGG CGACCTATAG
 
Protein sequence
MRDGWHVEPL SKVCQLINRG ISPVYLDDGG TAVLNQKCIR DHSINYDLGR RHCVTTKRVS 
ADKLVRVGDV LVNSTGTGTL GRVAQVRDEP HEPTTVDSHV TIVRPKDGLF FPEFFGYALI
AIENQIQEGG EGCGGQTELA RSKLANDYHV SFPTSIPEQR RIVAILDEAF EGIATAKANA
EKNLQNAREV FESHLNAVFS QRGEGWVEKR LDEVGKTQTG STPKASEPEN LGKHIPFVKP
GDFKPDGSIT YDNEGLSQNG AAKARLVMAP SAIMVCIGAT IGKSAYANRI IATNQQINSL
TPATGISAKM VYYQMITVDF QRRVHENAGQ ATLPIINKSK WSSLSIFIPP TVDEQNHIVA
RLDNLHEETQ RLESLYQKKL IALDELKQSL LHQAFNGDL