| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_4264 |
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| Symbol | hsdS-2 |
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| ID | 1171867 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 4439626 |
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| End bp | 4441113 |
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| Gene Length | 1488 bp |
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| Protein Length | 495 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637345989 |
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| Product | type I restriction-modification system, S subunit |
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| Protein accession | NP_719791 |
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| Protein GI | 24375748 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0732] Restriction endonuclease S subunits |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAACCAAG TGATTCCAGA GGGCTGGTTT TCAGCTGTAT TAGGCAATGC TGTAGATGTA
AAAAGTGGTG TTGGTTTTCC GAAGAAATAT CAAGGTAAAA ATAGTGGTGA TTATCCCGTA
TATAAAGTGG GCGATGTTTC TATTGCTGTG ACATCTAAGT ATGGGGGACT ATCTGAAGCT
GGTCATTACG TTAGCCAATC AGAAGCCGAA GAATTGAAAG GTGTTATTTT TAGAGAAGGC
ACTACTCTTT TTGCAAAAAT CGGTGAAGCA GTAAAACTAA ATAGACGGGC GTTTGTGGAA
CGTAACGGTT TGGCTGATAA CAACGTTATG GCAGTTGTAC CTAATTATAC TGAGATGGAT
CGTTTTATTT ATTATTTTAT GCGAACAGTT AATTTATCAG ACGTGTCTCG CTCAACAACT
GTTCCGTCAG TACGAAAAGG TGATATTGAA GAGCTAGTTA TATCGTACCC CCCTCTAGCC
GAACAAAAGG TCATTGCCGA CAAGCTGGAT GAACTGCTGG GACAGGTTGA AAGTACCAAA
GCCCGCCTCG ATGCCATTCC CGCCATCTTA AAATCATTCC GCCAATCCGT CCTAGCCGCC
GCAGTCAGTG GCAAATTGAC GGAAAAATGG AGAGATCGAA ACAATAGCGA AATGGTTCAT
GGAGGAGAGC TTTACTCACT AGCTAAAAAG CATCACCTAA AGTTTTACGG AAAAAAGTAC
AAAGCACCTG AACCTCTTGA TTTAAGAATG CTTGAAACTT TACCTCAAGG TTGGGTATAT
GGTGTTGTAT CACATTTGGT AGAGCCTGGT TCTGAAATTA TGTATGGGAT AGTTCAACCG
GGTCCCAAAT TAGATGAAGG AATACCATAC GTTAGAGGAA CTGATATACA AAATGGTCAA
ATATTAGTTC ATCAATTAAT GAAAACTAGT CCGGAAATAG CGAAAAAATA TGAAAGGGCT
ACATTATCAG GGAATGATAT TTTGCTTGGC ATCATTCGTG CTACGAAAGT TGCTATTGTT
CCAGATGAAC TTAAGGGAGC TAATATAACG CAAGGTACGG CTCGTTTGAG AGTCTTTGAG
GGCGTTCTGA CCTATAAATA TCTGGCTATT TATTTAGAGT CACCCAAAGT GCAATCATGG
TTGCACTCAA ATTACCGAGG CATTGATATG CCTGGTTTGA ATCTAAAAGA TGTTAGAAGG
CTACCTATAG CATTGCCATC AAAAGAAGAA CAAACAGAAA TCGTCCGCCG TGTCGAAGAC
TTATTCGTTT TCGCCGACAA AGTCGAAGCC CAGGTCAATG CCGCGCAATT ACGGGTCAAT
AACCTCACTC AGTCGATACT CGCTAAAGCC TTCAGAGGTG AACTCACCGC CGAGTGGCGC
ACTGCTAACC CTGAACTGAT TTCCGGTAAA AACAGCGCCG AGGCGCTGCT GGAAAAAATC
AAAGTCGAGC GTGTAGTAGC CAAGTCAACT AAAAAGAAGT GGGAGTAG
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| Protein sequence | MNQVIPEGWF SAVLGNAVDV KSGVGFPKKY QGKNSGDYPV YKVGDVSIAV TSKYGGLSEA
GHYVSQSEAE ELKGVIFREG TTLFAKIGEA VKLNRRAFVE RNGLADNNVM AVVPNYTEMD
RFIYYFMRTV NLSDVSRSTT VPSVRKGDIE ELVISYPPLA EQKVIADKLD ELLGQVESTK
ARLDAIPAIL KSFRQSVLAA AVSGKLTEKW RDRNNSEMVH GGELYSLAKK HHLKFYGKKY
KAPEPLDLRM LETLPQGWVY GVVSHLVEPG SEIMYGIVQP GPKLDEGIPY VRGTDIQNGQ
ILVHQLMKTS PEIAKKYERA TLSGNDILLG IIRATKVAIV PDELKGANIT QGTARLRVFE
GVLTYKYLAI YLESPKVQSW LHSNYRGIDM PGLNLKDVRR LPIALPSKEE QTEIVRRVED
LFVFADKVEA QVNAAQLRVN NLTQSILAKA FRGELTAEWR TANPELISGK NSAEALLEKI
KVERVVAKST KKKWE
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