Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xfasm12_0262 |
Symbol | |
ID | 6119765 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M12 |
Kingdom | Bacteria |
Replicon accession | NC_010513 |
Strand | - |
Start bp | 307827 |
End bp | 308909 |
Gene Length | 1083 bp |
Protein Length | 360 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 641648342 |
Product | type I restriction-modification system specificity determinant |
Protein accession | YP_001774917 |
Protein GI | 170729484 |
COG category | [V] Defense mechanisms |
COG ID | [COG0732] Restriction endonuclease S subunits |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.874092 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAGCG TGCCGCTTAA CGACACGTCG AACTTCGAGC TGATCAGCGG TCTTTGGAAA GAAGCACGTG GACCCTTGAA GTCAACCAGA GTCCTACGTA GCACGAACTT CGCAGGCGAT GGGATGCTCG ACTTCGATGA TGTGGTGGAG CTGGAGGTCG AGAATCGACA CTTTGCCTCG CGGCAACTTC AACCCGGGGA CATCATCATC GAATGCTCTG GTGGCGGCCC AAAGCAGCCC GTCGGTAGGG CCGCACTCTT CGTCCCCTTC GACGATCACA TGTACTTCTC CAGCAACTTC ACAACAACGA TTCGTATCCA AGATCAACCG CTATTCAACC CTGGCTACAT CGCCCTCTAT TTGCACGCGC TCTACCTTGA TGGAGCTACT GAAACCCTCC AACGCGCAAC AACGGGTATT CGCAATCTGG ACTGGCGTGA GTACCTCCGA ATCGAAGTGC CAGCACATCC TCTGCAGGAA CAACAGTCCC TCGCGCGCCT TATCATTGGC GTACGCACCG CCTATCGGAA CGAACAGCAC CTCTCTCAAA CATTCATGGC ACTGAAGCGC TCAGCGCTTA GCAGCATCTT CACACACGGC CTGCGCGGTG AAGCACAGAA GGACACCGAG ATCGGGCCGA TGCCGATTGA CTGGACCGTA GAGCGACTGG ATGCCTGTGC TCGGGTTGTA AGCACGCGAA TGTCCTACAC CGAACTTGAA GTAGCAGAAA ACACGACGGA GACCCCGGAG AATGCTGTTC GCGTCATTGG CATCAAAGTC TCCGATATGA ATCACGCTGG TAACGAGACC GTGCTTGTGA GAACGGCGCT AGAAAAAGCG CTTGATGCAA CGCAGGCCAC GCACCAGTGC GCTCCGCCCG GCACGATAGT CTTTCCGAAG CGGGGTGCCG CGATTGCTAC GAACAAGAAG CGTCTGACGG ACACATGGAG TGTCTTCGAC CCCAACGTCA TTGGTGTTGT CCCGGGTGGC TCGATCAATC CTCGCTTCCT TTTTCAATGG TTCCAGTTTT TTGACCTAAA GGGCATCACA GAATCTGGCC CCACACCTCA GCTCAACAAA TAG
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Protein sequence | MKSVPLNDTS NFELISGLWK EARGPLKSTR VLRSTNFAGD GMLDFDDVVE LEVENRHFAS RQLQPGDIII ECSGGGPKQP VGRAALFVPF DDHMYFSSNF TTTIRIQDQP LFNPGYIALY LHALYLDGAT ETLQRATTGI RNLDWREYLR IEVPAHPLQE QQSLARLIIG VRTAYRNEQH LSQTFMALKR SALSSIFTHG LRGEAQKDTE IGPMPIDWTV ERLDACARVV STRMSYTELE VAENTTETPE NAVRVIGIKV SDMNHAGNET VLVRTALEKA LDATQATHQC APPGTIVFPK RGAAIATNKK RLTDTWSVFD PNVIGVVPGG SINPRFLFQW FQFFDLKGIT ESGPTPQLNK
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