Gene Clim_0128 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_0128 
Symbol 
ID6356093 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand
Start bp138953 
End bp141493 
Gene Length2541 bp 
Protein Length846 aa 
Translation table11 
GC content54% 
IMG OID642667751 
ProductN-6 DNA methylase 
Protein accessionYP_001942207 
Protein GI189345678 
COG category[V] Defense mechanisms 
COG ID[COG0286] Type I restriction-modification system methyltransferase subunit
[COG0732] Restriction endonuclease S subunits 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTGATA CCGATACAAA ACGCCGCATC GACACCGCAC GCGATATCCT CGTCGGTAAA 
GTCCCCGATC CCAAGTCCCA GGTGGAGCAG ATCACCATCG CGCTGATCTA CAAGTTCATG
GATGACATGG ACGCCGAGTC GGAGGAACTT GGAGGCAAGC GCAAATTCTT CACCGGCAAT
TTTGTCCGAT ACGGCTGGGC CAAGTTCATG GATCGAAGTC TCGGCGGTCA CGAAATGCTC
GGCCTCTACA GCGAAGGAAT TGCCAAGATG CCCGAGAACC CAGGTATTCC AGCACTCTTT
CGCGATATTT TCAAAAACGC CTACCTCCCA TACCGTGACC CTGAAACGCT CAAAGCCTTT
CTCAAAATCA TCGATGAATT CACCTACGAC CACAGCGAAC GACTCGGAGA CGCTTTCGAG
TATCTGCTAA GCGTCTTGGG CAGCCAGGGC GATGCCGGCC AGTTCCGCAC CCCGCGTCAC
ATCATTGATT TTATGGTCGA GATTCTTGTC CCGCAAAAAA ACGAGACTAT TCTCGATCCT
GCCTGCGGCA CCGCCGGATT CCTCATCTCT GCATACAAGC ATATCCTGCG TACCAACACT
GACACCGATG GGCATAGCAC CCTCACACCC GACGAAAAGG GGCGCCTCGC AAGGAATTTC
AAGGGTTACG ACATATCGCC CGACATGGTG CGCCTCTCTC TGGTGAATCT GTATCTGCAC
GGTTTCACCG ATCCGCACAT TTTTGAATAC GACACTCTCT CCTCCGAGGA GCGCTGGAAT
GAATTTGCCG ACGTCATTCT CGCCAACCCG CCCTTCATGT CCCCGAAAGG CGGTATCAAG
CCGCACAAGC GATTCTCCAT CCAGGCCAAG CGCAGCGAAG TTCTTTTCGT GGACTACATG
GCCGAGCACC TCACCCCAGC CGGCCGCGCC GGTATAATCG TCCCGGAGGG CATCATCTTT
CAGAGTCAGA TGGCCTATAA AGAACTGCGA AAGATGCTCG TCGAAAACTC TCTCGTCGCC
GTCATCTCTC TCCCTGCTGG CTGTTTCAAT CCCTACTCCG GGGTGAAGAC GAGTATCCTG
ATCCTCGACA AATCCCTCGC CCGCCAGAGT GACACCATCG CATTCTTCAA GGTCGAAAAC
GACGGGTTCG GCCTCGGTGC CCAGCGAAGA GCCATAGAGA AAAACGACCT TCCGCAGGTG
CAGGCCGAAC TCGCAGCGCA CCTGCAAGCC TTGCGCTCCA GGGCTGCCAC CGAGTCACAC
GCCATAACCA CCGGCCTTAT CGTACCGAAA GAGAAGATCG CCACGAATGG CGACTACAAC
CTCAGTGGAG AGCGGTATCG GGAGGGTGAT CCGGTAAATC ACAAGTGGCC GATTGTCTCG
CTTGACGAAA TATGCACATT TATGACAGGA GGGACACCCA CATCGACGAT TGCTGAGTAT
TACGAAGGAG GAACTGTTCC CTGGCTCGTA TCAGGAGACA TTCACGGGTT TGAAATTATG
GCCTGTGAAA AAAGGATTAC ACAGAAGGCT GTTGAGAACT CGAATGCCAA AGTCCTTCCA
AAAGATAGCG TTCTTATAGC CCTAAACGGA CAAGGGAAAA CTCGGGGAAC AGTTGCGTTG
CTTCGAATGA CCGGTGCGAC TTGCAATCAG TCGCTGGTCG CCATCACGCC AGCGCCCCCC
CCCAGAGCAA TTTCTGAATT CATCTTTTGG GCGCTACGCT CTATGTATTC TGACATCCGT
GCACTCACGG GAGACACAGA GCGCAGCGGA CTGAACATTC CTATCCTAAA AAACATCCAA
ATCCCCCTGC CGCCGCTGGA AGTGCAGAAG GAAGTCGTAG CGGAAATCGA GGGCTACCAG
AATGTCATCA ACGGCGCCCG CGCCGTCCTT GATAACTACC GACCTCACAT ACCCATCCAC
CCCGACTGGC CGATGGTGCC GCTTGGTGAA GCATGCGTTG TGAACCCCCG TAAGTCTGAG
GTGGCTGACC ATGTGGGTAC CACAGTCGTG TCATTCGTCC CAATGTCGGA TGTCGGCGAG
CACGAGATGT TCTTTGAGCT CAAAGACACA AAGCGACTGG ACGAGGTAAC TACCAGCTAC
ACTTACTTCA AAGATGGCGA TGTCCTTCTT GCAAAGGTTA CCCCTTGTTT TGAAAACGGG
AAGGCAGGCA TTGCTCGCAA CCTTCGTAAC GGAATAGGTT TCGGTTCAAG TGAGTTCTAT
GTATTGAGGC CTACGGGGGA TCTTCTCCCA CAGTGGGTGT TTATGTTTGC AGCAACACCC
TCATTCCGTA CGTGGGCTAC CCCACAGATG ACAGGCACAG GCGGGTTGCA ACGTGTTCCT
CGTTCGGTTG TTGAGAATTA TCAAATCCCC GTCCCTCCCT TGGCCACACA GCAAGCTATC
GTGGCGGAGA TCGAAGCCGA GCAAGCGCTG GTCGCCGCCA ACCGCGAACT GATCGTTCGC
TTCGAGAAGA AAATTCAATC CACCCTTGCC CGCATCTGGG GGAAAGCTAA TGAAACAGCA
GAAGCGGAGA TATCGCAATG A
 
Protein sequence
MLDTDTKRRI DTARDILVGK VPDPKSQVEQ ITIALIYKFM DDMDAESEEL GGKRKFFTGN 
FVRYGWAKFM DRSLGGHEML GLYSEGIAKM PENPGIPALF RDIFKNAYLP YRDPETLKAF
LKIIDEFTYD HSERLGDAFE YLLSVLGSQG DAGQFRTPRH IIDFMVEILV PQKNETILDP
ACGTAGFLIS AYKHILRTNT DTDGHSTLTP DEKGRLARNF KGYDISPDMV RLSLVNLYLH
GFTDPHIFEY DTLSSEERWN EFADVILANP PFMSPKGGIK PHKRFSIQAK RSEVLFVDYM
AEHLTPAGRA GIIVPEGIIF QSQMAYKELR KMLVENSLVA VISLPAGCFN PYSGVKTSIL
ILDKSLARQS DTIAFFKVEN DGFGLGAQRR AIEKNDLPQV QAELAAHLQA LRSRAATESH
AITTGLIVPK EKIATNGDYN LSGERYREGD PVNHKWPIVS LDEICTFMTG GTPTSTIAEY
YEGGTVPWLV SGDIHGFEIM ACEKRITQKA VENSNAKVLP KDSVLIALNG QGKTRGTVAL
LRMTGATCNQ SLVAITPAPP PRAISEFIFW ALRSMYSDIR ALTGDTERSG LNIPILKNIQ
IPLPPLEVQK EVVAEIEGYQ NVINGARAVL DNYRPHIPIH PDWPMVPLGE ACVVNPRKSE
VADHVGTTVV SFVPMSDVGE HEMFFELKDT KRLDEVTTSY TYFKDGDVLL AKVTPCFENG
KAGIARNLRN GIGFGSSEFY VLRPTGDLLP QWVFMFAATP SFRTWATPQM TGTGGLQRVP
RSVVENYQIP VPPLATQQAI VAEIEAEQAL VAANRELIVR FEKKIQSTLA RIWGKANETA
EAEISQ