Gene Bcav_0504 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_0504 
Symbol 
ID7857868 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp558875 
End bp560101 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content61% 
IMG OID643864582 
Productrestriction modification system DNA specificity domain protein 
Protein accessionYP_002880529 
Protein GI229819003 
COG category[V] Defense mechanisms 
COG ID[COG0732] Restriction endonuclease S subunits 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCGCA TCGACGACCT CATCCGGCGG TACGCGCCCG ACGGCGTTGA GTACATCGAG 
CTCGCAGAAC TGTTCTCGAC CAGAAACGGC TACACGCCGC CTAAATCCGA TGCGTCGGCT
TGGGCAGACG GCACAGTGCC GTGGTTCCGG ATGGAAGACA TCCGCGAGAA AGGCCGCGTG
CTCGACGACT CGATCCAGCA CATCGCCACG ACGGCGGTCA AAGGTGGTCG GCTGTTTCCA
GCCAACTCGA TCATCGTCGC GACTTCGGCG ACGATCGGGG AGCACGCACT CATCTCGGTC
CCGCACCTGT CGAACCAGAG GTTCACTTCG CTCGCGCTCA AACCGAAGTA CCAGGATCGC
TTCGAGATCA AGTTCATCTT CTACTACTGC TTCGTACTCG ACGAGTGGTG CAAGAACAAC
ACCACAGTCT CCAGCTTTGC CTCTGTCGAC ATGGTCGGAC TCAAGAAGTT CAAATTCCCG
GCGCCACCGC TTGAAGTCCA GCGCGATATC GTGCGAATCC TGGATGCCTT CACGGAGCTG
GAGGCGGAGC TGGAGGCGGA GCTGGAGGCC CGCAAGCAGC AGTACGCCCA CTACCGGGAC
GCGCTTCTCT CATTCGGCGG AAGTGAGGCA GTGAGCTGGG CGACCTTGAG CGAACTCTGT
ACGATCCAGT CTGGCGGCAC CCCGAAGTCA GACAATGCCG TGTATTACGG CGGCGACATC
CCTTGGTGTG CGATCAGCGA TATTACGTCG GCCTCAAAGT ACATCCGGAG GACGCAGAGG
ACTATCACGC CAGAGGGGCT GGCCAACAGT TCCGCGAAGG TGTTCGATGC GGGGACACTC
CTGCTTTCGA TCTATGCGAG TCTCGGGGAG GTCACGATCA CTAGCATCCC GATGGCCACC
AACCAGGCGA TCCTCGGCCT CGTACCTCGA GACGGCTCGG GCATCCTTGT CGACTATCTG
TACTACACGA TGTTGAGTTC GAAGGACAGA CTCCTCGCTC AGCGCCAGGT GGGATCCCAG
AACAACCTGA ACAAGGCGAT CGTCGCCGAC TTCCGAGTCC CGGTTCCGGC TATGCCTGAC
CAGGAGCGCA TCGTCGCCCT GCTCGACAAG TTCGACGCGC TGGTGAACGA CCTGTCGTCG
GGGCTGCCGG CGGAGATCGA GGCTCGTCGT CAGCAGTACG CGCACTACCG CGACCGGCTG
CTGTCGTTCG AGGAGCTGAC GGTCTGA
 
Protein sequence
MSRIDDLIRR YAPDGVEYIE LAELFSTRNG YTPPKSDASA WADGTVPWFR MEDIREKGRV 
LDDSIQHIAT TAVKGGRLFP ANSIIVATSA TIGEHALISV PHLSNQRFTS LALKPKYQDR
FEIKFIFYYC FVLDEWCKNN TTVSSFASVD MVGLKKFKFP APPLEVQRDI VRILDAFTEL
EAELEAELEA RKQQYAHYRD ALLSFGGSEA VSWATLSELC TIQSGGTPKS DNAVYYGGDI
PWCAISDITS ASKYIRRTQR TITPEGLANS SAKVFDAGTL LLSIYASLGE VTITSIPMAT
NQAILGLVPR DGSGILVDYL YYTMLSSKDR LLAQRQVGSQ NNLNKAIVAD FRVPVPAMPD
QERIVALLDK FDALVNDLSS GLPAEIEARR QQYAHYRDRL LSFEELTV