| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_4622 |
|---|
| Symbol | |
|---|
| ID | 8450250 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | - |
|---|
| Start bp | 5143727 |
|---|
| End bp | 5144962 |
|---|
| Gene Length | 1236 bp |
|---|
| Protein Length | 411 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 645043663 |
|---|
| Product | Restriction endonuclease S subunits-like protein |
|---|
| Protein accession | YP_003203890 |
|---|
| Protein GI | 258654734 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0732] Restriction endonuclease S subunits |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 50 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.156513 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGGCG ATCTCACTAC GCTCGGAGCT GTTGTTAAGG CCACCGGGGG CGTCCTCCAA
ACCGGGCCCT TCGGAAGTCA GCTTCACGCC AGTGACTACC AGTTCACCGG CAAACCACTC
GTAATGCCGG TGAATCTCGG AGACAACGAA ATCCGGGAGG CTGGCATTGC GCGCATCGGG
GTTGAGGACG CTCACAGACT GCGTCGCCAT GCTCTGCGGG AGGGCGACAT CATTTTCAGC
AGGAGAGGAG ACGTTGGTCG TCGATCCCTC GTGCGGACGA GAGAGGCGGG TTGGCTCTGC
GGGACAGGCT GCCTCGCGGC TCGATTTGGA AGTGACCGGA CGACGGTCAA TCCGGCGTAC
GTCGCTGACT ACCTTGGAGG GACGTCGGCG CAGGCATGGC TCGTCGACAA TGCCGTTGGC
GGGACCATGC CCAACCTGAA TACAAGCATT CTTTCGGCAT TACCCGTGTG GCTACCGTCG
AAATTGGAGC AGGACCGTAT TGTTGCCGCG CTTGAAGATG TCCGGAAAGT GATCGATTCC
ATCCAGCACC TTATCGCCAA GAGGCAGGCG ATCAAGCAAG GCATGATGCA GCATCTCCTT
ACGGGTCGAA CGCGGCTCCC AGGTTTCAAC GAGGCATGGA GCGAGACAAC GCTCGGAGCT
GTCGCACGTT TCAGCAAGGG TGCGGGACTT CCGAAGGCGG CTCTGACATC TTCTGGCTCG
ACCCTGTGTA TTCATTACGG TGAGCTATTC ACGTTCTACG GTCCCGAAAT CCGTCAGGTT
TTCAGCCGAA CAACGCCTAC CGGACGCGTG GTCGTGTCTG AGGACCTCGA TGTCCTGATG
CCTACGTCCG ATGTGACACC ACGCGGACTG GCTAAAGCCA GTGCGATCCA CGGCGCCGGA
GTCGTATTGG GCGGCGACAT CCTTATCATT CGACCTGACA AGGCACATGC TCATGGCCCG
TTCGTCGCTC ACGCCATTCG GCATCACGCG GACCAAGTGC TCCAGCTCGT GCGCGGGTCC
ACTGTCTACC ACCTGTATGC CACTGACATG CGAAATTTCG CGCTCTCGCT CCCGTCGGTG
AATGAGCAGC GTGCGATCGC CGGCGCACTG CTTGACGCCG ATCGACAACT CGAAGCGTTG
GAGGAGCGTC TGATGAAGGC TCGCGCCTTC AAGACCGGAA TGATGCAGCG CCTCCTGACT
GGACATACGC GCTTGCCGAC GGAGGCCGCG ACATGA
|
|---|
| Protein sequence | MSGDLTTLGA VVKATGGVLQ TGPFGSQLHA SDYQFTGKPL VMPVNLGDNE IREAGIARIG
VEDAHRLRRH ALREGDIIFS RRGDVGRRSL VRTREAGWLC GTGCLAARFG SDRTTVNPAY
VADYLGGTSA QAWLVDNAVG GTMPNLNTSI LSALPVWLPS KLEQDRIVAA LEDVRKVIDS
IQHLIAKRQA IKQGMMQHLL TGRTRLPGFN EAWSETTLGA VARFSKGAGL PKAALTSSGS
TLCIHYGELF TFYGPEIRQV FSRTTPTGRV VVSEDLDVLM PTSDVTPRGL AKASAIHGAG
VVLGGDILII RPDKAHAHGP FVAHAIRHHA DQVLQLVRGS TVYHLYATDM RNFALSLPSV
NEQRAIAGAL LDADRQLEAL EERLMKARAF KTGMMQRLLT GHTRLPTEAA T
|
|---|
| |