Gene Noca_1105 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_1105 
Symbol 
ID4599358 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand+ 
Start bp1167904 
End bp1168581 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content61% 
IMG OID639775701 
Productrestriction modification system DNA specificity subunit 
Protein accessionYP_922308 
Protein GI119715343 
COG category[V] Defense mechanisms 
COG ID[COG0732] Restriction endonuclease S subunits 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGTCGCA TCGATCGCCT CATCGCGGAA CTCGCGCCGC AGGGGGTGCC GCTTATGCCG 
CTGGGTCAGC TTGGTGAGTT CATACGTGGC CGTCGATTCA CGAAAGCCGA CTACGTCGAC 
TCCGGACTCG GCTCAATTCA CTACGGCGAG ATTTACACCG ACTACGGCAC GACCGCGTCA 
TCGGTACATC GGTTCGTTCG TCCCGAGTTG AAGGGAAGCC TCCGCCTGGC TCGCCCAGGT 
GACTTGGTCA TCGCGGCAAC GGGCGAGAAC GTACAGGAAG TATGCAAGGC GGTCGCTTGG 
CTGGGCGACG AAGAGGTTGC CATCCACGAT GATTGCTACA TCTTCCGTCA CCAGATGGAT 
CCGACGTTTG TCTCGTACTT CTTTCAGACC GCCCACTTCC ACGAGCAAAA GGCACGGCTG 
GCCTCCGAGT CGAAGCTTGC GCGGGTGTCC GGTGCGAACC TGGCCAGGAT CGTTGCTCCC 
GCTCCGCCAC TGGAGGTGCA GCGAGAGATC GTCAGCGTCC TGGACAAGTT CAGAGCTCTT 
GAAGCCGAGC TCAAGGCCGA GCTTGAAGCA CGGCGTGAGC AGTACAGGTA CTACCGCGAC 
GCGCTGGTGG CGTTCGACGC GCCTGACTCT CTCTCTCTCT CTCTCTCTCG CAGAGCAGGC 
TCAGATGGGC GAGACTGA
 
Protein sequence
MSRIDRLIAE LAPQGVPLMP LGQLGEFIRG RRFTKADYVD SGLGSIHYGE IYTDYGTTAS 
SVHRFVRPEL KGSLRLARPG DLVIAATGEN VQEVCKAVAW LGDEEVAIHD DCYIFRHQMD 
PTFVSYFFQT AHFHEQKARL ASESKLARVS GANLARIVAP APPLEVQREI VSVLDKFRAL 
EAELKAELEA RREQYRYYRD ALVAFDAPDS LSLSLSRRAG SDGRD