273 homologs were found in PanDaTox collection
for query gene Bfae_04070 on replicon NC_013172
Organism: Brachybacterium faecium DSM 4810



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013172  Bfae_04070  ABC-type sugar transport system, periplasmic component  100 
 
 
444 aa  896    Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_3304  extracellular solute-binding protein family 1  45.56 
 
 
441 aa  395  1e-108  Beutenbergia cavernae DSM 12333  Bacteria  normal  hitchhiker  0.00753481 
 
 
-
 
NC_013947  Snas_0048  extracellular solute-binding protein family 1  33.33 
 
 
434 aa  232  8.000000000000001e-60  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_2574  extracellular solute-binding protein family 1  30.96 
 
 
449 aa  197  4.0000000000000005e-49  Actinosynnema mirum DSM 43827  Bacteria  normal  0.316894  n/a   
 
 
-
 
NC_013172  Bfae_17020  ABC-type sugar transport system, periplasmic component  33.58 
 
 
431 aa  191  2.9999999999999997e-47  Brachybacterium faecium DSM 4810  Bacteria  decreased coverage  0.00301962  n/a   
 
 
-
 
NC_013174  Jden_0101  extracellular solute-binding protein family 1  32.09 
 
 
438 aa  185  2.0000000000000003e-45  Jonesia denitrificans DSM 20603  Bacteria  normal  0.494877  normal  0.060225 
 
 
-
 
NC_013521  Sked_03920  carbohydrate-binding protein  30.2 
 
 
437 aa  184  2.0000000000000003e-45  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013174  Jden_0381  extracellular solute-binding protein family 1  28.95 
 
 
445 aa  184  3e-45  Jonesia denitrificans DSM 20603  Bacteria  normal  0.491759  normal 
 
 
-
 
NC_010816  BLD_0923  MalE-type ABC sugar transport system periplasmic component  27.67 
 
 
450 aa  173  5.999999999999999e-42  Bifidobacterium longum DJO10A  Bacteria  normal  0.293658  n/a   
 
 
-
 
NC_013174  Jden_0310  extracellular solute-binding protein family 1  30.21 
 
 
440 aa  172  1e-41  Jonesia denitrificans DSM 20603  Bacteria  normal  0.0877495  normal  0.113221 
 
 
-
 
NC_013521  Sked_06560  ABC-type sugar transport system, periplasmic component  30.14 
 
 
453 aa  172  2e-41  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_010816  BLD_0922  MalE-type ABC sugar transport system periplasmic component  28.35 
 
 
447 aa  157  4e-37  Bifidobacterium longum DJO10A  Bacteria  normal  0.755265  n/a   
 
 
-
 
NC_013172  Bfae_04000  ABC-type sugar transport system, periplasmic component  30.79 
 
 
445 aa  154  2e-36  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_4059  extracellular solute-binding protein family 1  28.67 
 
 
440 aa  154  2.9999999999999998e-36  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_1927  extracellular solute-binding protein family 1  28.77 
 
 
439 aa  150  6e-35  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_1454  extracellular solute-binding protein family 1  28.82 
 
 
445 aa  148  2.0000000000000003e-34  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.71759  normal 
 
 
-
 
NC_010816  BLD_1762  MalE-type ABC sugar transport system periplasmic component  29.91 
 
 
438 aa  148  2.0000000000000003e-34  Bifidobacterium longum DJO10A  Bacteria  decreased coverage  0.0000740157  n/a   
 
 
-
 
NC_010816  BLD_0921  MalE-type ABC sugar transport system periplasmic component  27.27 
 
 
458 aa  141  3e-32  Bifidobacterium longum DJO10A  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_5099  extracellular solute-binding protein family 1  26.43 
 
 
444 aa  140  4.999999999999999e-32  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.291523  normal  0.0224239 
 
 
-
 
NC_013131  Caci_4419  extracellular solute-binding protein family 1  27.07 
 
 
456 aa  137  5e-31  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013721  HMPREF0424_1064  extracellular solute-binding protein  28.62 
 
 
480 aa  132  9e-30  Gardnerella vaginalis 409-05  Bacteria  n/a    normal  0.075314 
 
 
-
 
NC_010816  BLD_1008  MalE-type ABC sugar transport system periplasmic component  25.6 
 
 
449 aa  127  4.0000000000000003e-28  Bifidobacterium longum DJO10A  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_4188  extracellular solute-binding protein family 1  25.74 
 
 
454 aa  108  1e-22  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.643354  normal  0.841697 
 
 
-
 
NC_011988  Avi_5398  ABC transporter substrate binding protein (sugar)  26.11 
 
 
403 aa  96.7  7e-19  Agrobacterium vitis S4  Bacteria  normal  0.14652  n/a   
 
 
-
 
NC_013525  Tter_0829  extracellular solute-binding protein family 1  27.3 
 
 
504 aa  95.1  2e-18  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_012852  Rleg_6156  extracellular solute-binding protein family 1  25.79 
 
 
410 aa  92.8  1e-17  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.889741  hitchhiker  0.000305646 
 
 
-
 
NC_009620  Smed_4916  extracellular solute-binding protein  26.65 
 
 
410 aa  90.5  5e-17  Sinorhizobium medicae WSM419  Bacteria  normal  0.06645  normal  0.512511 
 
 
-
 
NC_011371  Rleg2_6572  extracellular solute-binding protein family 1  25.06 
 
 
410 aa  88.2  3e-16  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  decreased coverage  0.00103217  normal  0.480926 
 
 
-
 
NC_009972  Haur_3641  extracellular solute-binding protein  25.29 
 
 
444 aa  83.2  0.000000000000008  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_6584  ABC transporter sugar binding protein  24.4 
 
 
437 aa  82.8  0.00000000000001  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_2031  extracellular solute-binding protein family 1  25.31 
 
 
442 aa  82  0.00000000000002  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.298737 
 
 
-
 
NC_011661  Dtur_0508  extracellular solute-binding protein family 1  25 
 
 
421 aa  76.6  0.0000000000008  Dictyoglomus turgidum DSM 6724  Bacteria  hitchhiker  0.0000506303  n/a   
 
 
-
 
NC_013526  Tter_2025  extracellular solute-binding protein family 1  25 
 
 
434 aa  75.5  0.000000000002  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.0000000165485  n/a   
 
 
-
 
NC_009620  Smed_4136  extracellular solute-binding protein  31.44 
 
 
424 aa  75.5  0.000000000002  Sinorhizobium medicae WSM419  Bacteria  normal  0.518326  normal 
 
 
-
 
NC_012669  Bcav_1711  extracellular solute-binding protein family 1  25.73 
 
 
454 aa  75.5  0.000000000002  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.795485  normal 
 
 
-
 
NC_013721  HMPREF0424_1316  extracellular solute-binding protein  25.07 
 
 
423 aa  74.7  0.000000000003  Gardnerella vaginalis 409-05  Bacteria  n/a    normal 
 
 
-
 
NC_013526  Tter_2644  extracellular solute-binding protein family 1  23.14 
 
 
431 aa  74.7  0.000000000003  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_013205  Aaci_1215  extracellular solute-binding protein family 1  24.8 
 
 
446 aa  74.7  0.000000000003  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  decreased coverage  0.0000064062  n/a   
 
 
-
 
NC_014210  Ndas_3337  extracellular solute-binding protein family 1  28.06 
 
 
427 aa  73.9  0.000000000005  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.806542  normal 
 
 
-
 
NC_012852  Rleg_6112  extracellular solute-binding protein family 1  24.29 
 
 
424 aa  73.9  0.000000000005  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.521338  normal 
 
 
-
 
NC_011371  Rleg2_6524  extracellular solute-binding protein family 1  25.24 
 
 
424 aa  73.9  0.000000000005  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.514278  normal  0.451088 
 
 
-
 
NC_013946  Mrub_2808  extracellular solute-binding protein family 1  26.01 
 
 
430 aa  73.6  0.000000000007  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.512241 
 
 
-
 
NC_013205  Aaci_0075  extracellular solute-binding protein family 1  30.49 
 
 
441 aa  73.2  0.000000000009  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_04270  extracellular solute-binding protein family 1  26.18 
 
 
418 aa  72.8  0.00000000001  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_2733  extracellular solute-binding protein family 1  26.67 
 
 
434 aa  73.2  0.00000000001  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0602915  normal  0.13145 
 
 
-
 
NC_010320  Teth514_1099  extracellular solute-binding protein  24.47 
 
 
457 aa  71.6  0.00000000003  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_009616  Tmel_0690  extracellular solute-binding protein  28.27 
 
 
402 aa  70.1  0.00000000007  Thermosipho melanesiensis BI429  Bacteria  normal  0.678935  n/a   
 
 
-
 
NC_011831  Cagg_0089  extracellular solute-binding protein family 1  27.04 
 
 
951 aa  70.1  0.00000000007  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_3983  extracellular solute-binding protein family 1  26.15 
 
 
456 aa  70.1  0.00000000008  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_008010  Dgeo_2859  extracellular solute-binding protein  24.8 
 
 
417 aa  69.3  0.0000000001  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.511665  n/a   
 
 
-
 
NC_011899  Hore_00780  extracellular solute-binding protein family 1  22.99 
 
 
411 aa  69.3  0.0000000001  Halothermothrix orenii H 168  Bacteria  normal  0.0480859  n/a   
 
 
-
 
NC_010320  Teth514_0753  extracellular solute-binding protein  25.9 
 
 
429 aa  69.3  0.0000000001  Thermoanaerobacter sp. X514  Bacteria  hitchhiker  0.00037903  n/a   
 
 
-
 
NC_009939  Dgeo_2919  ABC-type sugar transport system, periplasmic component  22.25 
 
 
407 aa  68.2  0.0000000003  Deinococcus geothermalis DSM 11300  Bacteria  n/a    n/a   
 
 
-
 
NC_010003  Pmob_0828  extracellular solute-binding protein  23.51 
 
 
424 aa  68.2  0.0000000003  Petrotoga mobilis SJ95  Bacteria  normal  0.142269  n/a   
 
 
-
 
NC_013159  Svir_11620  ABC-type sugar transport system, periplasmic component  25.61 
 
 
426 aa  67.4  0.0000000005  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_013201  Hmuk_3222  extracellular solute-binding protein family 1  27.65 
 
 
457 aa  67  0.0000000006  Halomicrobium mukohataei DSM 12286  Archaea  normal  0.950328  normal  0.818094 
 
 
-
 
NC_013521  Sked_03090  ABC-type sugar transport system, periplasmic component  27.68 
 
 
419 aa  67  0.0000000006  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.033461  normal 
 
 
-
 
NC_009523  RoseRS_2818  extracellular solute-binding protein  24.64 
 
 
488 aa  66.6  0.0000000009  Roseiflexus sp. RS-1  Bacteria  normal  0.179577  normal 
 
 
-
 
NC_012669  Bcav_1680  extracellular solute-binding protein family 1  26.51 
 
 
430 aa  66.6  0.0000000009  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.173253  normal 
 
 
-
 
NC_013595  Sros_3538  Maltose-binding periplasmic protein/domains- like protein  27.08 
 
 
406 aa  65.9  0.000000001  Streptosporangium roseum DSM 43021  Bacteria  normal  0.385239  normal 
 
 
-
 
NC_011831  Cagg_2195  extracellular solute-binding protein family 1  26.89 
 
 
450 aa  65.5  0.000000002  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_1708  extracellular solute-binding protein family 1  26.77 
 
 
458 aa  65.5  0.000000002  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.190784  normal 
 
 
-
 
NC_013946  Mrub_0284  extracellular solute-binding protein family 1  26.02 
 
 
410 aa  65.1  0.000000003  Meiothermus ruber DSM 1279  Bacteria  normal  0.0514987  normal 
 
 
-
 
NC_012850  Rleg_3393  extracellular solute-binding protein family 1  24.92 
 
 
412 aa  64.3  0.000000004  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.205631 
 
 
-
 
NC_012669  Bcav_3712  extracellular solute-binding protein family 1  25 
 
 
421 aa  63.9  0.000000005  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.411366 
 
 
-
 
NC_010717  PXO_00880  ABC transporter sugar binding protein  22.9 
 
 
440 aa  63.5  0.000000007  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.106592  n/a   
 
 
-
 
NC_012669  Bcav_1698  extracellular solute-binding protein family 1  24.76 
 
 
447 aa  63.2  0.000000008  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_012917  PC1_0736  extracellular solute-binding protein family 1  29.38 
 
 
421 aa  63.2  0.000000009  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_0972  extracellular solute-binding protein family 1  29.38 
 
 
421 aa  63.2  0.00000001  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_3988  extracellular solute-binding protein family 1  23.66 
 
 
422 aa  62.8  0.00000001  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_014213  Mesil_3394  ABC-type sugar transport systems permease component  23.41 
 
 
411 aa  62.8  0.00000001  Meiothermus silvanus DSM 9946  Bacteria  normal  0.498756  normal  0.24931 
 
 
-
 
NC_009486  Tpet_0322  extracellular solute-binding protein  21.84 
 
 
419 aa  62.4  0.00000002  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_2896  extracellular solute-binding protein  23.96 
 
 
452 aa  62  0.00000002  Roseiflexus sp. RS-1  Bacteria  normal  0.034507  normal 
 
 
-
 
NC_009767  Rcas_1879  extracellular solute-binding protein  23.96 
 
 
452 aa  62  0.00000002  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.29051 
 
 
-
 
NC_014165  Tbis_1886  extracellular solute-binding protein family 1  26.69 
 
 
435 aa  62  0.00000002  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.23125 
 
 
-
 
NC_013205  Aaci_0770  extracellular solute-binding protein family 1  22.87 
 
 
444 aa  61.6  0.00000003  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_0890  extracellular solute-binding protein  23.7 
 
 
450 aa  61.6  0.00000003  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.315589  n/a   
 
 
-
 
NC_013093  Amir_0348  extracellular solute-binding protein family 1  26.59 
 
 
419 aa  61.6  0.00000003  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_15040  extracellular solute-binding protein family 1  24.56 
 
 
458 aa  60.8  0.00000004  Halothermothrix orenii H 168  Bacteria  normal  0.751229  n/a   
 
 
-
 
NC_009664  Krad_0589  extracellular solute-binding protein family 1  28.95 
 
 
452 aa  61.2  0.00000004  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.289831  normal  0.0417818 
 
 
-
 
NC_013131  Caci_6904  extracellular solute-binding protein family 1  25.95 
 
 
404 aa  60.8  0.00000004  Catenulispora acidiphila DSM 44928  Bacteria  decreased coverage  0.000382644  hitchhiker  0.00751503 
 
 
-
 
NC_010320  Teth514_2201  extracellular solute-binding protein  24.39 
 
 
420 aa  60.5  0.00000005  Thermoanaerobacter sp. X514  Bacteria  normal  0.455559  n/a   
 
 
-
 
NC_013411  GYMC61_2959  extracellular solute-binding protein family 1  25.65 
 
 
437 aa  60.5  0.00000006  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013595  Sros_4883  ABC-type sugar transport system periplasmic component-like protein  24.05 
 
 
417 aa  60.5  0.00000007  Streptosporangium roseum DSM 43021  Bacteria  normal  0.134037  normal  0.0630481 
 
 
-
 
NC_011369  Rleg2_3121  extracellular solute-binding protein family 1  24.28 
 
 
412 aa  60.1  0.00000007  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_011886  Achl_3534  extracellular solute-binding protein family 1  24.87 
 
 
445 aa  60.1  0.00000008  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.582574 
 
 
-
 
NC_002977  MCA1941  sugar ABC transporter, sugar-binding protein, putative  23.77 
 
 
434 aa  59.3  0.0000001  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_013171  Apre_0238  extracellular solute-binding protein family 1  23.97 
 
 
423 aa  59.3  0.0000001  Anaerococcus prevotii DSM 20548  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_0397  extracellular solute-binding protein  24.05 
 
 
428 aa  59.7  0.0000001  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_3339  Maltose-binding periplasmic protein/domains- like protein  29.94 
 
 
431 aa  58.5  0.0000002  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.202326 
 
 
-
 
NC_009953  Sare_0747  extracellular solute-binding protein  26.61 
 
 
433 aa  58.5  0.0000002  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.00190936 
 
 
-
 
NC_009767  Rcas_2546  extracellular solute-binding protein  23.99 
 
 
488 aa  58.5  0.0000003  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.39868  normal  0.139719 
 
 
-
 
NC_014210  Ndas_0659  extracellular solute-binding protein family 1  26.21 
 
 
425 aa  58.2  0.0000003  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.579585  normal  0.728331 
 
 
-
 
NC_013521  Sked_11600  ABC-type sugar transport system, periplasmic component  27.36 
 
 
444 aa  57.8  0.0000004  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.558288  normal  0.039331 
 
 
-
 
NC_013595  Sros_7725  ABC-type sugar transport system periplasmic component-like protein  24.64 
 
 
420 aa  57.8  0.0000004  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_008698  Tpen_1453  extracellular solute-binding protein  21.65 
 
 
415 aa  57.8  0.0000004  Thermofilum pendens Hrk 5  Archaea  normal  0.0104666  n/a   
 
 
-
 
NC_008699  Noca_4632  extracellular solute-binding protein  25.86 
 
 
419 aa  57.8  0.0000004  Nocardioides sp. JS614  Bacteria  normal  0.448727  n/a   
 
 
-
 
NC_009380  Strop_0803  extracellular solute-binding protein  26.7 
 
 
433 aa  57.8  0.0000004  Salinispora tropica CNB-440  Bacteria  normal  0.437157  normal 
 
 
-
 
NC_012669  Bcav_0276  extracellular solute-binding protein family 1  31.03 
 
 
439 aa  57.4  0.0000005  Beutenbergia cavernae DSM 12333  Bacteria  hitchhiker  0.00588273  hitchhiker  0.000015311 
 
 
-
 
NC_009636  Smed_3329  extracellular solute-binding protein  26.18 
 
 
428 aa  57.4  0.0000005  Sinorhizobium medicae WSM419  Bacteria  normal  0.955635  normal  0.757839 
 
 
-
 
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