Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_0803 |
Symbol | |
ID | 5057246 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 891824 |
End bp | 893125 |
Gene Length | 1302 bp |
Protein Length | 433 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640473072 |
Product | extracellular solute-binding protein |
Protein accession | YP_001157658 |
Protein GI | 145593361 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.437157 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTCGCA CAGCCAAGGG AGTCGCCGTA CTCGCCTCCA CCGCCCTTGC TCTGACCCTC GTCGCCTGTG GCGGCGAGGA GCAGGGTGCG GGGGAAGGGT CAACGACCGA CCCCGCAACC ATGAAGGCCG AACTGACCTG GTGGGACACC TCGGACCCGA AGAACGAGGG CCCGGTTTTC CAGGAGCTGA TCGCCAGGTT CAACCAGACC TATCCGAACG TGAAGATCAA CTATCAGTCG GTTCCGTTCG GTGAGGCCCA GAACCAGTTC AAGACGGCAG CGCAGGCCGA GACGGGTGCG CCGGACATCC TGCGGGCGGA GGTGGCCTGG GTTCCGGAGT TCGCCTCGCT GGGCTACCTC TACGCGCTGG ACGGCTCCGA ACTACTCGCC GACGAATCGG ACTTCCTGGC GACTCCGCTC GCCTCGAACA AGTACGACGG CAAGACCTAC GGCGTCCCGC AGGTGACCGA CACGCTGTCG CTCATGTACA ACAAGAAGCT GCTGGCCGAG GCGGGTGTCG CCGCGGCGCC GACGACCTGG GCCGAGCTGA AGACCGCCGC CCAGGCCGTC AAGCAGAAGA CCGGCGCGGA CGGCCTCTAC CTCAATCCGG CGGGTTACTT CCTGCTGCCG TTCCTCTACG GGGAGGGCGG GGACCTGGTT GATGTCCCGG CCAAGAAGAT CGTCATCGGC TCGGACCAGA ACGTGGCCGG GCTGAAGATC GCCAAGGACC TGATCGACAG TGGCGCGGCC GTCCCGCCGC CCGCGACGGA CTCCTACGGA ACCATGATGA CCCTCTTCAA GGAAGAGAAG GTCGCCATGA TCATTAATGG TCCCTGGGAG GTCAACAACG TTGCGCAGGC GCCGACCTTC GGCGGCGTGG AGAACCTTGG CATCGCCCCG GTTCCCAGCG GCTCGGCCCG GGCCGGTGGT CCGGTCGGTG GGCACAACTA CACCATTTGG TCCGGTATGT CGGAGGAGAA GGTCGAGGCC GCCGTCGCCT TCGTGGCCTT CATGAGCTCC ACCGAATCAC AGGCCTTCCT CGCGGAGAAG CTCGGGCTGC TGCCGACGCG TAAGTCGGCC TACGAAATCG ACGCGGTGCT GAGCAATCCG ATCGTGACCG CGTACCAGCC GGCCGTCGAG GCCGCGGTTG GCCGCCCCTG GATCCCCGAG GCCGGCCAGT TCTTCGACCC GCTGGACCAG ATGGCCACCG AGGTCCTGAT CCAGAACCGG GACCCGAAGG CCGCGCTCGA CGAGGTCGCG AAGAGGTACC AGGCTGAGGT CGTCACCGCG TACGGGTTCT GA
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Protein sequence | MRRTAKGVAV LASTALALTL VACGGEEQGA GEGSTTDPAT MKAELTWWDT SDPKNEGPVF QELIARFNQT YPNVKINYQS VPFGEAQNQF KTAAQAETGA PDILRAEVAW VPEFASLGYL YALDGSELLA DESDFLATPL ASNKYDGKTY GVPQVTDTLS LMYNKKLLAE AGVAAAPTTW AELKTAAQAV KQKTGADGLY LNPAGYFLLP FLYGEGGDLV DVPAKKIVIG SDQNVAGLKI AKDLIDSGAA VPPPATDSYG TMMTLFKEEK VAMIINGPWE VNNVAQAPTF GGVENLGIAP VPSGSARAGG PVGGHNYTIW SGMSEEKVEA AVAFVAFMSS TESQAFLAEK LGLLPTRKSA YEIDAVLSNP IVTAYQPAVE AAVGRPWIPE AGQFFDPLDQ MATEVLIQNR DPKAALDEVA KRYQAEVVTA YGF
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