Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_1927 |
Symbol | |
ID | 8326112 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 2140041 |
End bp | 2141360 |
Gene Length | 1320 bp |
Protein Length | 439 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644942476 |
Product | extracellular solute-binding protein family 1 |
Protein accession | YP_003099721 |
Protein GI | 256376061 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCGGAA GCCCGTTCAA GACCGCATCG CTGCTCGCCG CCGCCCTCCT CGCCGCAACA GCCGTCACGG CCTGCGGGAG CGATGACGGC GGACCGGGCC CGGATGGCAA GATCCACGTC TCCGTGTGGG CGTGGTACCC GGAGTTCAAG GGCGTCGTGG ACGCCTTCAA CGCCTCGCAC GACGACATCC AGGTGGACTG GACCAACGTG GGCACGGGGC CCGACCAGTA CGCCAAGCTC AAGACCGCGT TCACGGCGGG CAAGGGCGCG CCGGACGTCG CGCAGGTCGA GTTCCAGCAG ATCCCGACGT TCATCATCCT CGACGCGCTC GCGGACATGG GCGAGCACGG GGCGAACGAG GACGAGGGGC TGTACGCGGA GTGGGCGTGG AGCCAGGCCA CGGACGGGGA CAAGGTCTAC GCCATCCCGG TCGACGGCGG GCCCATGGCG CTGATGTACC GGAAGGACCT GTTCGAGCAG AACGGGATTC CGGTGCCGAG GACGTGGGAC GAGTACCGGA GCGCGGCGGA GCGGATCAAG GAGGTCGATC CGAACGGGCA CATCGCCAGC TTCGGCAGCG ACGGCGGGTG GATCAACGGG TTGATGTGGC AGGCCGGGTG CAGGCCGTAC GGGTACTCGC AGGCCAAGGC CCGCGACGAG GTGCGGATCA GCTTGACCAG CCCGGAGTGC GTGAAGGTGG TGGAGTTCTA CGGGGACCTG GTGTCGCGGG GGTTGATGGC GGAGGACCCG TTCTTCACGG CTGACGCGAC CGCGGCGCTG GACTCGGGGA AGTACTGGAC GTGGGCCGCG GCGGGGTGGA CGCCGGGGTA CGTGGCCGGG TCGTTGAAGA ACACGGCCGG GAAGTGGGCG GTGGCGCCGA TGCCGCAGTG GAACCCCGGT GCGGACGAGC AGGGGGACTG GGGCGGGTCG ACGTTCACGG TCACCAAGCA GGCGCGCAAC GCGCAGGCCG CGACGAAGGT GGCGCGGGAG CTGTTCGGGA AGTCCGAGGC CGCCTGGGAC ATCGGGTTGA ACAAGGCGTT CCTGTACCCG CTGGTGAAGG ACGTCGCGGC GAGCGCGGAG TTCACGGGCA AGGAGTACGA GTTCTTCGCG GGGCAGAAGG TGAACGAGAT CTTCGTGCCG GTGTCGGACA AGCTGGGGGA GTTCCAGTAC ACGCCGTTCC AGGACTTCGT GTTCGGTGAT CTGAACGACC GGAGCGCGGA GGCGATGGCG GGGACCCGGC CGTGGAGCGA GGTGCTCCCG GAGACGGAGA AGAACGTCGT CGCGTACGCG GAGAAGCAGG GCTTCCGGGT GACGCGGTGA
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Protein sequence | MRGSPFKTAS LLAAALLAAT AVTACGSDDG GPGPDGKIHV SVWAWYPEFK GVVDAFNASH DDIQVDWTNV GTGPDQYAKL KTAFTAGKGA PDVAQVEFQQ IPTFIILDAL ADMGEHGANE DEGLYAEWAW SQATDGDKVY AIPVDGGPMA LMYRKDLFEQ NGIPVPRTWD EYRSAAERIK EVDPNGHIAS FGSDGGWING LMWQAGCRPY GYSQAKARDE VRISLTSPEC VKVVEFYGDL VSRGLMAEDP FFTADATAAL DSGKYWTWAA AGWTPGYVAG SLKNTAGKWA VAPMPQWNPG ADEQGDWGGS TFTVTKQARN AQAATKVARE LFGKSEAAWD IGLNKAFLYP LVKDVAASAE FTGKEYEFFA GQKVNEIFVP VSDKLGEFQY TPFQDFVFGD LNDRSAEAMA GTRPWSEVLP ETEKNVVAYA EKQGFRVTR
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