| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_1927 |
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| Symbol | |
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| ID | 8326112 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 2140041 |
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| End bp | 2141360 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644942476 |
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| Product | extracellular solute-binding protein family 1 |
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| Protein accession | YP_003099721 |
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| Protein GI | 256376061 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCGGAA GCCCGTTCAA GACCGCATCG CTGCTCGCCG CCGCCCTCCT CGCCGCAACA
GCCGTCACGG CCTGCGGGAG CGATGACGGC GGACCGGGCC CGGATGGCAA GATCCACGTC
TCCGTGTGGG CGTGGTACCC GGAGTTCAAG GGCGTCGTGG ACGCCTTCAA CGCCTCGCAC
GACGACATCC AGGTGGACTG GACCAACGTG GGCACGGGGC CCGACCAGTA CGCCAAGCTC
AAGACCGCGT TCACGGCGGG CAAGGGCGCG CCGGACGTCG CGCAGGTCGA GTTCCAGCAG
ATCCCGACGT TCATCATCCT CGACGCGCTC GCGGACATGG GCGAGCACGG GGCGAACGAG
GACGAGGGGC TGTACGCGGA GTGGGCGTGG AGCCAGGCCA CGGACGGGGA CAAGGTCTAC
GCCATCCCGG TCGACGGCGG GCCCATGGCG CTGATGTACC GGAAGGACCT GTTCGAGCAG
AACGGGATTC CGGTGCCGAG GACGTGGGAC GAGTACCGGA GCGCGGCGGA GCGGATCAAG
GAGGTCGATC CGAACGGGCA CATCGCCAGC TTCGGCAGCG ACGGCGGGTG GATCAACGGG
TTGATGTGGC AGGCCGGGTG CAGGCCGTAC GGGTACTCGC AGGCCAAGGC CCGCGACGAG
GTGCGGATCA GCTTGACCAG CCCGGAGTGC GTGAAGGTGG TGGAGTTCTA CGGGGACCTG
GTGTCGCGGG GGTTGATGGC GGAGGACCCG TTCTTCACGG CTGACGCGAC CGCGGCGCTG
GACTCGGGGA AGTACTGGAC GTGGGCCGCG GCGGGGTGGA CGCCGGGGTA CGTGGCCGGG
TCGTTGAAGA ACACGGCCGG GAAGTGGGCG GTGGCGCCGA TGCCGCAGTG GAACCCCGGT
GCGGACGAGC AGGGGGACTG GGGCGGGTCG ACGTTCACGG TCACCAAGCA GGCGCGCAAC
GCGCAGGCCG CGACGAAGGT GGCGCGGGAG CTGTTCGGGA AGTCCGAGGC CGCCTGGGAC
ATCGGGTTGA ACAAGGCGTT CCTGTACCCG CTGGTGAAGG ACGTCGCGGC GAGCGCGGAG
TTCACGGGCA AGGAGTACGA GTTCTTCGCG GGGCAGAAGG TGAACGAGAT CTTCGTGCCG
GTGTCGGACA AGCTGGGGGA GTTCCAGTAC ACGCCGTTCC AGGACTTCGT GTTCGGTGAT
CTGAACGACC GGAGCGCGGA GGCGATGGCG GGGACCCGGC CGTGGAGCGA GGTGCTCCCG
GAGACGGAGA AGAACGTCGT CGCGTACGCG GAGAAGCAGG GCTTCCGGGT GACGCGGTGA
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| Protein sequence | MRGSPFKTAS LLAAALLAAT AVTACGSDDG GPGPDGKIHV SVWAWYPEFK GVVDAFNASH
DDIQVDWTNV GTGPDQYAKL KTAFTAGKGA PDVAQVEFQQ IPTFIILDAL ADMGEHGANE
DEGLYAEWAW SQATDGDKVY AIPVDGGPMA LMYRKDLFEQ NGIPVPRTWD EYRSAAERIK
EVDPNGHIAS FGSDGGWING LMWQAGCRPY GYSQAKARDE VRISLTSPEC VKVVEFYGDL
VSRGLMAEDP FFTADATAAL DSGKYWTWAA AGWTPGYVAG SLKNTAGKWA VAPMPQWNPG
ADEQGDWGGS TFTVTKQARN AQAATKVARE LFGKSEAAWD IGLNKAFLYP LVKDVAASAE
FTGKEYEFFA GQKVNEIFVP VSDKLGEFQY TPFQDFVFGD LNDRSAEAMA GTRPWSEVLP
ETEKNVVAYA EKQGFRVTR
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