Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_3304 |
Symbol | |
ID | 7861776 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | - |
Start bp | 3661312 |
End bp | 3662637 |
Gene Length | 1326 bp |
Protein Length | 441 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 643867404 |
Product | extracellular solute-binding protein family 1 |
Protein accession | YP_002883309 |
Protein GI | 229821783 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.00753481 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGGCGGCA TCTCGAGGCG TAGGGCGCTC CAGCTGGGCC TCGGCGCGAG CGCCGGAGCG GCGCTCGCCG CCTGTGCGCC GGCGACGGCG AACCCCAACA CCCAGCCGGT GATCCCGCGG GCGGACGGAC CGGTCCGTCT GACGTACTGG GCGTGGCTCA AGGACCTGCA GAACGTGTGC GACATCTGGA ACGCCGCGAA CCCGGACGTG CAGGTCGACG CGGTCTGGAT CCAGGGCGGC AACGGCGGCG GCTACCAGAA GATGTTCTCG GCGCTCGCGG CCGGCGGCGG ACCGGACATC GGCCAGGTCG AGCTGCGCCA GGTTCCGGCG TTCATGCTGG TCAACGGCCT GGTCGACGTC GCTCGGTACG GGATGAACGA CGTCACCGAC CGCTACGACG AGGCGCTCGT CAGCCAGGTC ACGTTCAACG ACGGCATCTT CGGCGTCCCG CAGGACTCCG GCCCGTGCGC GTTCTACTAC CGCACCGACC TGCTCGAGGG CATCGGCGCG CAGGCCCCGA CCACCTGGGA CGAGTGGGCC GAGCTCGCCG CAGAGGTCCG GTCGGCTGAC GCCTACCTCG AGTCGTTCAA CGTCGGCGAC ACGTCAGGCT TCTGCTCCTT CGCCACCCAG GCCGGTGCGA ACTGGTGGCA GATCGACGGC GACGCCTGGG TCGTCGACAT GGCCGACGAC GTCACGCTGG AGGTCGCCGA CTTCTTCGAT CGCGCCGTCG ACCAGGACCT GCTGGACACC GGCTTCGGCG CCTTCTCGCC CGGCTGGTAC GCCGCCGTCG CGAACGACGG CATCTACGCG GTGACGAGCG CGTCGTGGGG CGACGCGCTC ATCCAGAGCG CCGCGAGCAC CGAGGGGCTG TGGCAGGTCG CGCCGATGCA GACCTGGCCC CAGGGCTACG GCTCGACCTA CCTCGGCGGG TCCACGGCCG CCGTCATGGC CAACTCGCGA CACCCCGCGG AGGCGCTCGA CTTCTGCGTG TGGATGACGA CGTCGGAGGA GGGGGTCGAC GCGATGATCG AGCACTGCGG GATCGGCTGG TCGCCGGCGC GCGACTTCAT CGGCACGCCG CGGATGGGGC CGTCGGAGTT CTTCGGCGGC CAGAGCTACA ACGAGGAGAT CTTCGTGCCG GCGGCGCAGG AGCAGAACAC CGACTGGACG TGGGCGCCCC CGACGCAACG CATCTTCAAC GTCCTCGCGG ACGGGTTCCG GCGCAAGCTG ACCGCCGGCG ACACGTTCGT CCAGGCCGTG CGCGACGCCC AGGACGCCAC GATCCGCATC CTGGCCGACT CCGGGCTCAA CGTGAGGTCG GCGTGA
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Protein sequence | MGGISRRRAL QLGLGASAGA ALAACAPATA NPNTQPVIPR ADGPVRLTYW AWLKDLQNVC DIWNAANPDV QVDAVWIQGG NGGGYQKMFS ALAAGGGPDI GQVELRQVPA FMLVNGLVDV ARYGMNDVTD RYDEALVSQV TFNDGIFGVP QDSGPCAFYY RTDLLEGIGA QAPTTWDEWA ELAAEVRSAD AYLESFNVGD TSGFCSFATQ AGANWWQIDG DAWVVDMADD VTLEVADFFD RAVDQDLLDT GFGAFSPGWY AAVANDGIYA VTSASWGDAL IQSAASTEGL WQVAPMQTWP QGYGSTYLGG STAAVMANSR HPAEALDFCV WMTTSEEGVD AMIEHCGIGW SPARDFIGTP RMGPSEFFGG QSYNEEIFVP AAQEQNTDWT WAPPTQRIFN VLADGFRRKL TAGDTFVQAV RDAQDATIRI LADSGLNVRS A
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