Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_11620 |
Symbol | |
ID | 8386499 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 1194432 |
End bp | 1195712 |
Gene Length | 1281 bp |
Protein Length | 426 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644975252 |
Product | ABC-type sugar transport system, periplasmic component |
Protein accession | YP_003133045 |
Protein GI | 257055213 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCTGGCAC TCGCCGCGGC CACCGCCTTG ACGGTGACCG CGTGCAGCGA GTCGGCCACG GACCAAAGCG ACGCGGCGGA GCGGGCGGCC AACGACCCCC AGTCCGTGAC GGGCACCGTC ACGTTCTGGG ACACCTCGGA CGCCACCAGC GAATCGCCCG CCTACAAAGA GCTGGTCAAG CGGTTCGAGG AGAAGTACCC GAAGATCACC GTCGACTACG TCAACGTCCC GTTCGACGGG GCGGACGACA AGTTCAAGAC CGCCGCGGCC AGCGGTGACG GCGCACCCGA CGTCATGCGG TCGGACGTGG GCTGGACCCC CACCTTCGCC GCGCTCGGCT ACCTCCAGCC GCTCGACGGC ACACCCGCGC TGGAGGGCTC CGACGACTAC CTTCCGGTGC CGATGGCCAG CAACGTCTAC GAGGACAAGA CCTACGGTGT TCCGCAGGTG ACCGACACGC TCGCCCTGCT GTACAACAAG GAGCACTTCG ACAAGGCCGG CATCGACGAG CCACCCTCCA CATGGGAGGA ACTGCGCAAG GCGGCGGAGA CCCTGGAGGA GAAGATCCCG GGCACCACGG GCATCTTCAT CAACGCCGAC TCCTACTACC TGCTGCCGTT CGTCTACGGC GAGGGCGCCG ACTACGTCGA CACCGAGGGC GAGCGCATCA CCATCGACAG CCCCGAGGTG AAGGCCGCCA TCGAGACCGT GCGCGAGCTG ACCGCCGACG GTGTGGGCAC CACCGACACG AGCGCGAACA AGTACACCAA CATGGTGGAC GGCTTCAAGA ACGGGTCCAT CAGCATGATC ATCAACGGCC CGTGGTCGAT GTCCGACACC CTCACCGGTA AGGCCTTCTC CGACCCCGAC AACCTCGGCG TCGCACCGGT TCCCGCCGGA CCCAAGGGCC AAGGCGGCCC GGTGGGCGGC CACAACTACA CCATCTACGC GGGCTCGGAC AACCTCGCCG CCTCCTACCT GTTCGTGCAG TTCATGAACT CGCCCGAAAG CCAGGCCTAC GTGGCGGCAC AGAACAACAC GCTGCCGACC CGGGAATCCG TCTACGAGGT TCCCGAGGTG GCGGACAACG AGGTGATCGA GGCCTTCGCC GAGCCGATCG AACAGGCTGT ACCACGGCCG CCCGCACCCG GCGCCGGAAC GCTGTACGAC CTGTTCACGC CGTTCTACGA GCAGATCCTC GGCGGCCAGA CCTCACTCGA GGACGGCTTG GCGCAGGCGC AGCGTAAGGC GAAGGACGCG GTGCCGGGCT ACGAGTCATG A
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Protein sequence | MLALAAATAL TVTACSESAT DQSDAAERAA NDPQSVTGTV TFWDTSDATS ESPAYKELVK RFEEKYPKIT VDYVNVPFDG ADDKFKTAAA SGDGAPDVMR SDVGWTPTFA ALGYLQPLDG TPALEGSDDY LPVPMASNVY EDKTYGVPQV TDTLALLYNK EHFDKAGIDE PPSTWEELRK AAETLEEKIP GTTGIFINAD SYYLLPFVYG EGADYVDTEG ERITIDSPEV KAAIETVREL TADGVGTTDT SANKYTNMVD GFKNGSISMI INGPWSMSDT LTGKAFSDPD NLGVAPVPAG PKGQGGPVGG HNYTIYAGSD NLAASYLFVQ FMNSPESQAY VAAQNNTLPT RESVYEVPEV ADNEVIEAFA EPIEQAVPRP PAPGAGTLYD LFTPFYEQIL GGQTSLEDGL AQAQRKAKDA VPGYES
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