Gene Apre_0238 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_0238 
Symbol 
ID8397012 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand
Start bp270458 
End bp271729 
Gene Length1272 bp 
Protein Length423 aa 
Translation table11 
GC content39% 
IMG OID644994599 
Productextracellular solute-binding protein family 1 
Protein accessionYP_003152011 
Protein GI257065755 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1653] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAA ATAAGAGATT TATTATAAGG AGGATGGTCT TCTTTTTGAT CGTTCTCATA 
AATCTTACTT CCTGTTCTAA TAAGGAAGAA AAGTCCGCAG ACGGTAGGGT CGTAATTGAA
TTTTTCAACC AGAAAAAAGA AATGGTCGAC ACCTTAGAGG AAATAGTAAA AGATTTTGAA
AAAGAAAATC CTGACATAAA GGTAAACATG ACAAGCGTAC CGGATGCCGG AACAGTTCTT
AAAACCCGTA TGCTTGCAGG CGATAGCCCA GATATCGTCA ATATCTACCC ACAAAATATG
GACTTTAAGG AATGGGCCAA GGCGGGCTAC TTTAAAGATC TAAGCGAAGC GAGCTATCTT
TCCAATATAG TAAATGATTA TGAAAAAAAG TACGCCATAG ACGGCAAAAT TTACAATGTC
CCTCTATCAG CTAACTTCTA TTGTATCTAC TACAATAAGA CAAAATTTGA TGAATTAGGG
CTAAAGGTTC CTGAAACTTG GAAAGAATTC AAAAAGCTTG TAGAAGATAT CAAGGCTAAG
GGAGAAGTTC CTTTTGCCGT AGCAGGTAGT GAGGGTTGGA CTCTAAATGG ATACCATCAA
CTTTCTTTGA TTAATATAAC AGGTAGTGAT GAGGGAGCAA ACGATTACTT AAGATATTCT
GAGGTGAATT CAATAAATGA AAATGACGAT ACTCTAGTAA AAGACAGCGA GTACCTAGAC
TTGCTAGCAG ATAAGGGAAA TGCTCAAAGA AACTGGGAAG GGGCCTCCTA CAATGATTCT
GTGGTTGCCT ACGCAACAGA AAAATCCCTA ATGCTTGCTG GTGGATCTTG GGTACTTGCG
GCAATTAGCC AACAAAACCC TGAATTTGAA GTAGCTACCT TTGCTTTCCC AGGAGTAAAT
AAGGGAGAGG AAGTTACAGT AGGAGCAGGA GACTTGGCAC TTTCTATATC AGAAAATACT
AAACACCCTG AAGAAGCAGA CCGCTTTCTA GAATACATGA CAAGTAAGGA AGCTATGCAA
AAGTACTACG ACGTAGATGG ATCACCGGTT GCTGTAAAGG GAGTAAAGGA GAATGAAGAT
TCGCCACTTG CACCTTTGTA TAAGCTTGCT TTTACCGACA GACATTATGT TTGGTTGGGT
CAAGAGTGGA ATAGTGAAGA GGACTTCTTC CAAGCTACAA CTAATTATCT ACTAACACAA
GACAGGGCCC AATTAGCTAA GGAGCTCAAT GCTTTCTTTA ATCCGATGAA AGCTAGCAAT
AAAAAGGAGT AA
 
Protein sequence
MKKNKRFIIR RMVFFLIVLI NLTSCSNKEE KSADGRVVIE FFNQKKEMVD TLEEIVKDFE 
KENPDIKVNM TSVPDAGTVL KTRMLAGDSP DIVNIYPQNM DFKEWAKAGY FKDLSEASYL
SNIVNDYEKK YAIDGKIYNV PLSANFYCIY YNKTKFDELG LKVPETWKEF KKLVEDIKAK
GEVPFAVAGS EGWTLNGYHQ LSLINITGSD EGANDYLRYS EVNSINENDD TLVKDSEYLD
LLADKGNAQR NWEGASYNDS VVAYATEKSL MLAGGSWVLA AISQQNPEFE VATFAFPGVN
KGEEVTVGAG DLALSISENT KHPEEADRFL EYMTSKEAMQ KYYDVDGSPV AVKGVKENED
SPLAPLYKLA FTDRHYVWLG QEWNSEEDFF QATTNYLLTQ DRAQLAKELN AFFNPMKASN
KKE