| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_0890 |
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| Symbol | |
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| ID | 5732791 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | - |
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| Start bp | 1016995 |
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| End bp | 1018347 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641278022 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001543666 |
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| Protein GI | 159897419 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.315589 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACCGTA AGCCATCTCA GCCACCCCGC ACAGTTCGTA GCCTTGGATT CAGTTTGATC
GTTCTGCTGA TCTTGGCTGC CTGTGGTCAA GCAGCCACGC CACCAACCCA AATCAACCCA
ACCAGCTTGC CCACCGATAC ACCGCCAACC GCCGTGCCAG CCCTCGCCAA CTCGGCAGAT
AAGGCCTTGG TTATTTGGTC AACTGGCTCA GAGGTCGAGG CACTTTCAAT TCAAGCAGCA
GCAGATATCT TTGTGCAGAA AAATCCTGGG GTCTTGATTA AAGTTCAAGC CTTGCCCTGG
AGCGATGCTC ATACCCAAAT TCTTGAGGCC ATCGCCGCCG ATCGCGGGCC AGATCTGATG
GCTGGCGGTA TGTCATGGGG CATCGAGTTT GGCAAATTGG GTGGCATGAT CGATCTGCAA
AAGGCCTATC CCGATGTGGT AAGCGATGTT AAGCAAAAGA TGTTGCCGCA ACTCCAAGAT
TCATTGTTCT TGGATACAGG CGAGGTCTAT GCATTACAAC TCGATGTGGC ATTGATGGGG
ATGTTCTATC GCACTGATTT GCTGCGCGAT TTAGTCGGCA TGCAACAAGC TCCCCAAAAC
TGGACTGAAC TGACCAAAGT GCTAGAAAAA GCCCGCACGA TCAATAAAAA AGGCTTTGCG
ATTGGCTGGG ATAACGCTGG CTGGATCAGC TACTTTACCT TTTTATATTC AGCTGGTGGC
AGTTTATATA ACGACGATTG CTCCAAAGCC ACAATCAACT CGGCGGCTGG CTTACAAGCT
CTGACCTACT TCCGCGATCT CTACACCAAA TATCAAATTC CCACCGATAC TGCCTTGGAT
ATTGAAGGCG GCCTCGAAAG CGGCGATTAT CTAGTGAGCT ATGCTGGCAC TTGGACGGTT
GCAGCACTGG AATTCAATCG GCCTGAGTTG GCGGGCAAAT GGGCCTTGGC TCCGCTGCCC
AAAAGCCCCA AAGGCCAAAG TGTTGCGTTC CTTGGAGGGC GGGTCATCGG CGTGATGGAA
GCTTCGCAGA ACAAAGATCT GGCTGCCGAA TTTATTCGCT TTTTGTATAC CGAAGAAGCG
GTTGCCGCCC AATCGGCCTA TGCACAAAGT GCCAGTAACT ATTATGTGCC GCCAAGTTTG
CCCTTGCTCA GCGCCGCCAA ATTGCCAACC CATATCGAAG CTGGCTTCCG TGGCTTGTTG
GAGCAATCGG CAGGCCCGCC CAAGTGCGTC GGCTGGGAAG AAAGCACCAC CGATGTCCAA
AAATTATTGC AAGAAGTCGT CTACAACAAT GCTGATCCCC AAGATGCTTT AGATCAAGCA
GCGGAGATCA TGAATCGCAA TTTACAACCA TAG
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| Protein sequence | MHRKPSQPPR TVRSLGFSLI VLLILAACGQ AATPPTQINP TSLPTDTPPT AVPALANSAD
KALVIWSTGS EVEALSIQAA ADIFVQKNPG VLIKVQALPW SDAHTQILEA IAADRGPDLM
AGGMSWGIEF GKLGGMIDLQ KAYPDVVSDV KQKMLPQLQD SLFLDTGEVY ALQLDVALMG
MFYRTDLLRD LVGMQQAPQN WTELTKVLEK ARTINKKGFA IGWDNAGWIS YFTFLYSAGG
SLYNDDCSKA TINSAAGLQA LTYFRDLYTK YQIPTDTALD IEGGLESGDY LVSYAGTWTV
AALEFNRPEL AGKWALAPLP KSPKGQSVAF LGGRVIGVME ASQNKDLAAE FIRFLYTEEA
VAAQSAYAQS ASNYYVPPSL PLLSAAKLPT HIEAGFRGLL EQSAGPPKCV GWEESTTDVQ
KLLQEVVYNN ADPQDALDQA AEIMNRNLQP
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