More than 300 homologs were found in PanDaTox collection
for query gene Noca_4632 on replicon NC_008699
Organism: Nocardioides sp. JS614



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008699  Noca_4632  extracellular solute-binding protein  100 
 
 
419 aa  845    Nocardioides sp. JS614  Bacteria  normal  0.448727  n/a   
 
 
-
 
NC_013595  Sros_4988  extracellular solute-binding protein  29.71 
 
 
414 aa  159  9e-38  Streptosporangium roseum DSM 43021  Bacteria  normal  0.601947  normal 
 
 
-
 
NC_013131  Caci_4688  extracellular solute-binding protein family 1  35.42 
 
 
418 aa  154  2e-36  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.733472 
 
 
-
 
NC_008262  CPR_0476  ABC transporter, substrate-binding protein  31.52 
 
 
427 aa  150  4e-35  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_06270  ABC-type sugar transport system, periplasmic component  31.36 
 
 
426 aa  145  1e-33  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_05090  ABC-type sugar transport system, periplasmic component  29.56 
 
 
430 aa  145  2e-33  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_7906  extracellular solute-binding protein family 1  33.44 
 
 
420 aa  145  2e-33  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.819994  normal 
 
 
-
 
NC_006274  BCZK1634  sugar ABC transporter, sugar-binding protein  29.37 
 
 
416 aa  141  1.9999999999999998e-32  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_1899  extracellular solute-binding protein, putative  29.13 
 
 
416 aa  140  3.9999999999999997e-32  Bacillus cereus ATCC 10987  Bacteria  normal  0.41529  n/a   
 
 
-
 
NC_011831  Cagg_0729  extracellular solute-binding protein family 1  29.1 
 
 
443 aa  136  7.000000000000001e-31  Chloroflexus aggregans DSM 9485  Bacteria  decreased coverage  0.0000254304  normal 
 
 
-
 
NC_013525  Tter_0183  extracellular solute-binding protein family 1  32.94 
 
 
429 aa  132  1.0000000000000001e-29  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_009664  Krad_2164  extracellular solute-binding protein family 1  30.77 
 
 
435 aa  132  1.0000000000000001e-29  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_3149  extracellular solute-binding protein  27.99 
 
 
427 aa  131  2.0000000000000002e-29  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_1655  extracellular solute-binding protein family 1  30.95 
 
 
425 aa  125  1e-27  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.186521  normal  0.186231 
 
 
-
 
NC_013205  Aaci_0795  extracellular solute-binding protein family 1  26.61 
 
 
460 aa  120  3e-26  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.215252  n/a   
 
 
-
 
NC_013411  GYMC61_1727  extracellular solute-binding protein family 1  29.94 
 
 
422 aa  119  9.999999999999999e-26  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_011831  Cagg_2267  extracellular solute-binding protein family 1  30.53 
 
 
445 aa  119  9.999999999999999e-26  Chloroflexus aggregans DSM 9485  Bacteria  normal  hitchhiker  0.00064551 
 
 
-
 
NC_009832  Spro_2571  extracellular solute-binding protein  28.74 
 
 
417 aa  118  1.9999999999999998e-25  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_013517  Sterm_0719  extracellular solute-binding protein family 1  26.79 
 
 
413 aa  117  3e-25  Sebaldella termitidis ATCC 33386  Bacteria  normal  0.0236757  n/a   
 
 
-
 
NC_011661  Dtur_0381  extracellular solute-binding protein family 1  27.94 
 
 
421 aa  115  2.0000000000000002e-24  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2504  extracellular solute-binding protein family 1  27.64 
 
 
442 aa  113  8.000000000000001e-24  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_27690  ABC-type sugar transport system, periplasmic component  30.26 
 
 
431 aa  112  1.0000000000000001e-23  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.340884 
 
 
-
 
NC_013739  Cwoe_4883  extracellular solute-binding protein family 1  28.22 
 
 
436 aa  112  2.0000000000000002e-23  Conexibacter woesei DSM 14684  Bacteria  normal  0.504344  normal 
 
 
-
 
NC_009565  TBFG_12341  periplasmic sugar-binding lipoprotein uspC  30.38 
 
 
440 aa  109  1e-22  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_0137  extracellular solute-binding protein family 1  28.61 
 
 
453 aa  108  2e-22  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_011886  Achl_3566  extracellular solute-binding protein family 1  27.46 
 
 
426 aa  108  2e-22  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_014212  Mesil_2466  extracellular solute-binding protein family 1  30.32 
 
 
415 aa  108  2e-22  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.0930087 
 
 
-
 
NC_013525  Tter_0829  extracellular solute-binding protein family 1  29.29 
 
 
504 aa  107  3e-22  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_007644  Moth_1484  extracellular solute-binding protein  28.15 
 
 
444 aa  107  3e-22  Moorella thermoacetica ATCC 39073  Bacteria  unclonable  0.00000000000980441  normal 
 
 
-
 
NC_010320  Teth514_2201  extracellular solute-binding protein  30.84 
 
 
420 aa  104  2e-21  Thermoanaerobacter sp. X514  Bacteria  normal  0.455559  n/a   
 
 
-
 
NC_013739  Cwoe_3957  extracellular solute-binding protein family 1  28.03 
 
 
432 aa  104  3e-21  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_3712  extracellular solute-binding protein family 1  28.47 
 
 
421 aa  104  3e-21  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.411366 
 
 
-
 
NC_013947  Snas_0203  extracellular solute-binding protein family 1  28.31 
 
 
441 aa  101  2e-20  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.346278  normal  0.123927 
 
 
-
 
NC_008025  Dgeo_0751  extracellular solute-binding protein  32.95 
 
 
411 aa  101  3e-20  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.0314212  normal 
 
 
-
 
NC_013595  Sros_3538  Maltose-binding periplasmic protein/domains- like protein  27.21 
 
 
406 aa  101  3e-20  Streptosporangium roseum DSM 43021  Bacteria  normal  0.385239  normal 
 
 
-
 
NC_013411  GYMC61_2731  extracellular solute-binding protein family 1  24.22 
 
 
454 aa  100  5e-20  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013721  HMPREF0424_1316  extracellular solute-binding protein  25.06 
 
 
423 aa  99.8  7e-20  Gardnerella vaginalis 409-05  Bacteria  n/a    normal 
 
 
-
 
NC_009767  Rcas_3566  extracellular solute-binding protein  25.3 
 
 
454 aa  99.8  7e-20  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.42847  normal  0.297516 
 
 
-
 
NC_008541  Arth_3146  extracellular solute-binding protein  25.79 
 
 
424 aa  99  1e-19  Arthrobacter sp. FB24  Bacteria  normal  0.0629231  n/a   
 
 
-
 
NC_010003  Pmob_0523  extracellular solute-binding protein  30.14 
 
 
416 aa  99.4  1e-19  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2513  extracellular solute-binding protein family 1  25.8 
 
 
441 aa  97.8  3e-19  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_011368  Rleg2_5349  extracellular solute-binding protein family 1  29.7 
 
 
406 aa  97.4  4e-19  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.535832 
 
 
-
 
NC_013174  Jden_0513  extracellular solute-binding protein family 1  25.74 
 
 
447 aa  97.1  5e-19  Jonesia denitrificans DSM 20603  Bacteria  decreased coverage  0.000000038068  hitchhiker  0.000703825 
 
 
-
 
NC_013595  Sros_6584  ABC transporter sugar binding protein  26.78 
 
 
437 aa  96.3  9e-19  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013159  Svir_11620  ABC-type sugar transport system, periplasmic component  27.98 
 
 
426 aa  96.3  9e-19  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_011899  Hore_20630  extracellular solute-binding protein family 1  26.94 
 
 
414 aa  95.9  1e-18  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_012850  Rleg_3430  extracellular solute-binding protein family 1  27.02 
 
 
415 aa  95.1  2e-18  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_03090  ABC-type sugar transport system, periplasmic component  29.24 
 
 
419 aa  94.7  3e-18  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.033461  normal 
 
 
-
 
NC_009616  Tmel_0690  extracellular solute-binding protein  25.73 
 
 
402 aa  94.7  3e-18  Thermosipho melanesiensis BI429  Bacteria  normal  0.678935  n/a   
 
 
-
 
NC_008698  Tpen_1152  extracellular solute-binding protein  26.88 
 
 
393 aa  94  4e-18  Thermofilum pendens Hrk 5  Archaea  normal  0.0401617  n/a   
 
 
-
 
NC_014213  Mesil_3422  ABC-type sugar transport systems permease component  26.14 
 
 
410 aa  94  4e-18  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_014213  Mesil_3226  Transcriptional regulator  26.14 
 
 
410 aa  94  4e-18  Meiothermus silvanus DSM 9946  Bacteria  normal  0.101031  normal 
 
 
-
 
NC_009523  RoseRS_1359  extracellular solute-binding protein  25.68 
 
 
458 aa  93.6  5e-18  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_2364  ABC-type sugar transport system periplasmic component-like protein  28.22 
 
 
416 aa  93.6  6e-18  Streptosporangium roseum DSM 43021  Bacteria  normal  0.128582  normal 
 
 
-
 
NC_013235  Namu_0514  extracellular solute-binding protein family 1  26.73 
 
 
426 aa  93.2  8e-18  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_007413  Ava_3042  extracellular solute-binding protein  29.18 
 
 
406 aa  92.8  9e-18  Anabaena variabilis ATCC 29413  Bacteria  normal  0.0658677  normal 
 
 
-
 
NC_013172  Bfae_29010  ABC-type sugar transport system, periplasmic component  30.16 
 
 
434 aa  92.8  1e-17  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_1468  extracellular solute-binding protein family 1  26.25 
 
 
457 aa  92  2e-17  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_009939  Dgeo_2919  ABC-type sugar transport system, periplasmic component  25 
 
 
407 aa  91.3  3e-17  Deinococcus geothermalis DSM 11300  Bacteria  n/a    n/a   
 
 
-
 
NC_013205  Aaci_0913  extracellular solute-binding protein family 1  28.52 
 
 
421 aa  90.9  4e-17  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_6732  extracellular solute-binding protein family 1  30.63 
 
 
425 aa  90.5  5e-17  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.255639  normal 
 
 
-
 
NC_012669  Bcav_3572  extracellular solute-binding protein family 1  28.18 
 
 
427 aa  90.1  6e-17  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.405751  normal 
 
 
-
 
NC_013947  Snas_3121  extracellular solute-binding protein family 1  30.07 
 
 
445 aa  90.1  6e-17  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  hitchhiker  0.00116931 
 
 
-
 
NC_013172  Bfae_04930  ABC-type sugar transport system, periplasmic component  28.29 
 
 
442 aa  89.7  9e-17  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_012034  Athe_0399  extracellular solute-binding protein family 1  28.43 
 
 
408 aa  88.6  2e-16  Anaerocellum thermophilum DSM 6725  Bacteria  unclonable  0.00000000195685  n/a   
 
 
-
 
NC_009953  Sare_2552  extracellular solute-binding protein  24.77 
 
 
443 aa  89  2e-16  Salinispora arenicola CNS-205  Bacteria  normal  decreased coverage  0.00000382941 
 
 
-
 
NC_013526  Tter_2315  extracellular solute-binding protein family 1  27.39 
 
 
503 aa  87.8  3e-16  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_5802  extracellular solute-binding protein family 1  25.81 
 
 
444 aa  87.8  3e-16  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.0809589 
 
 
-
 
NC_013131  Caci_4697  extracellular solute-binding protein family 1  26.29 
 
 
442 aa  88.2  3e-16  Catenulispora acidiphila DSM 44928  Bacteria  hitchhiker  0.00367387  normal 
 
 
-
 
NC_013946  Mrub_0045  extracellular solute-binding protein family 1  26.63 
 
 
414 aa  87.4  4e-16  Meiothermus ruber DSM 1279  Bacteria  normal  0.713374  normal 
 
 
-
 
NC_013530  Xcel_2537  extracellular solute-binding protein family 1  28.19 
 
 
450 aa  87  5e-16  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.272028  n/a   
 
 
-
 
NC_012669  Bcav_1680  extracellular solute-binding protein family 1  26.1 
 
 
430 aa  87  5e-16  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.173253  normal 
 
 
-
 
NC_014210  Ndas_3999  extracellular solute-binding protein family 1  26.5 
 
 
452 aa  87  5e-16  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.220113  normal  0.250177 
 
 
-
 
NC_011769  DvMF_0656  extracellular solute-binding protein family 1  25.19 
 
 
431 aa  86.7  7e-16  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.31335 
 
 
-
 
NC_012669  Bcav_2274  extracellular solute-binding protein family 1  29.82 
 
 
428 aa  86.7  7e-16  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.837023  normal 
 
 
-
 
NC_010003  Pmob_0954  extracellular solute-binding protein  23.91 
 
 
399 aa  86.7  7e-16  Petrotoga mobilis SJ95  Bacteria  normal  0.0450213  n/a   
 
 
-
 
NC_011661  Dtur_0375  extracellular solute-binding protein family 1  28.15 
 
 
421 aa  86.7  7e-16  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_4984  extracellular solute-binding protein family 1  26.99 
 
 
432 aa  85.9  0.000000000000001  Catenulispora acidiphila DSM 44928  Bacteria  decreased coverage  0.000108283  decreased coverage  0.000897425 
 
 
-
 
NC_011369  Rleg2_3121  extracellular solute-binding protein family 1  26.57 
 
 
412 aa  85.9  0.000000000000001  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_011988  Avi_6240  ABC transporter substrate binding protein (maltose)  24.67 
 
 
407 aa  85.9  0.000000000000001  Agrobacterium vitis S4  Bacteria  normal  0.0994607  n/a   
 
 
-
 
NC_011899  Hore_00780  extracellular solute-binding protein family 1  23.9 
 
 
411 aa  85.1  0.000000000000002  Halothermothrix orenii H 168  Bacteria  normal  0.0480859  n/a   
 
 
-
 
NC_009380  Strop_2403  extracellular solute-binding protein  24 
 
 
441 aa  85.1  0.000000000000002  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_009620  Smed_4557  extracellular solute-binding protein  26.45 
 
 
412 aa  85.1  0.000000000000002  Sinorhizobium medicae WSM419  Bacteria  normal  0.302395  normal 
 
 
-
 
NC_013517  Sterm_4038  extracellular solute-binding protein family 1  25.23 
 
 
405 aa  85.5  0.000000000000002  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_014213  Mesil_3394  ABC-type sugar transport systems permease component  26.75 
 
 
411 aa  85.5  0.000000000000002  Meiothermus silvanus DSM 9946  Bacteria  normal  0.498756  normal  0.24931 
 
 
-
 
NC_010001  Cphy_0291  extracellular solute-binding protein  26.36 
 
 
449 aa  85.5  0.000000000000002  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_0592  extracellular solute-binding protein  23.95 
 
 
456 aa  85.1  0.000000000000002  Clostridium phytofermentans ISDg  Bacteria  decreased coverage  0.000165278  n/a   
 
 
-
 
NC_013521  Sked_05420  ABC-type sugar transport system, periplasmic component  30.8 
 
 
438 aa  84.7  0.000000000000003  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.0143899  normal 
 
 
-
 
NC_011661  Dtur_0378  extracellular solute-binding protein family 1  27.81 
 
 
420 aa  84.7  0.000000000000003  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_28390  ABC-type sugar transport system, periplasmic component  28.08 
 
 
453 aa  84.7  0.000000000000003  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_4267  extracellular solute-binding protein family 1  30.22 
 
 
400 aa  84  0.000000000000004  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_012850  Rleg_3393  extracellular solute-binding protein family 1  26.57 
 
 
412 aa  84.3  0.000000000000004  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.205631 
 
 
-
 
NC_004311  BRA0748  sugar ABC transporter, periplasmic sugar-binding protein, putative  23.72 
 
 
411 aa  84  0.000000000000005  Brucella suis 1330  Bacteria  normal  0.537127  n/a   
 
 
-
 
NC_011891  A2cp1_4289  extracellular solute-binding protein family 1  30.22 
 
 
400 aa  83.6  0.000000000000005  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.53848  n/a   
 
 
-
 
NC_007760  Adeh_4136  ABC sugar transporter, periplasmic ligand binding protein  29.85 
 
 
400 aa  83.6  0.000000000000006  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_0897  extracellular solute-binding protein family 1  27.56 
 
 
446 aa  83.2  0.000000000000007  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.0316444  n/a   
 
 
-
 
NC_013745  Htur_4488  extracellular solute-binding protein family 1  26.93 
 
 
434 aa  83.2  0.000000000000008  Haloterrigena turkmenica DSM 5511  Archaea  normal  0.395657  n/a   
 
 
-
 
NC_013526  Tter_2218  extracellular solute-binding protein family 1  26.09 
 
 
479 aa  83.2  0.000000000000008  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.00910899  n/a   
 
 
-
 
NC_013093  Amir_1846  extracellular solute-binding protein family 1  26.77 
 
 
425 aa  83.2  0.000000000000008  Actinosynnema mirum DSM 43827  Bacteria  normal  0.169612  n/a   
 
 
-
 
NC_009667  Oant_2485  extracellular solute-binding protein  25.26 
 
 
415 aa  83.2  0.000000000000008  Ochrobactrum anthropi ATCC 49188  Bacteria  decreased coverage  0.00421769  n/a   
 
 
-
 
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