| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_0729 |
|---|
| Symbol | |
|---|
| ID | 7268048 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chloroflexus aggregans DSM 9485 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011831 |
|---|
| Strand | - |
|---|
| Start bp | 907390 |
|---|
| End bp | 908721 |
|---|
| Gene Length | 1332 bp |
|---|
| Protein Length | 443 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 643565580 |
|---|
| Product | extracellular solute-binding protein family 1 |
|---|
| Protein accession | YP_002462089 |
|---|
| Protein GI | 219847656 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.0000254304 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGCTTC GGAAACACAC TCTGTCGTGG ATTGCGCTGA TTGCCCTGTT TACCGTGATG
CTAGCGGCGT GTGGCGGTGG TCAGCCTACC ACAGGGAGTG GCAGTGGTGG GCAAAGCGGC
AGCAGTGCGA ATACCGGTGG CAGCGGCCAA GCGGTTACCA TTCGCTGGCG GACTCGCCCC
GGTGATGCTG CCGAGCAGCG TGTCTATGAA GAGTTAAATA CCCTTGTCAA CGAAAAACTC
AAGGATAAAG GGATCACCGC AGTATACGAT CCGGCGCCCA ATCAGGGCTA CTTCGAGAAG
CTGAAGACCG AGTTGGCAGC CGGCAATGCC CCTGACATCT TCTGGATCGG TGGTGTCGAG
TTAGCGGATT TTGTCAATAC CGGTCAGATT CTCGATCTGA AGCCACTGAT CGATGCCGAT
AGCAGCTTCC AGTTGAGCAA CTTTTACCCG AACGTGATCG AGCAGTTGAC GCGCGATGGG
AAGATCTACG GTCTGCCGCG CGACATCTCG ACGATGGTCG TGTATTACAA CGAAGACCTG
TTCAAAGCCG CAGGCTTGAA GACGCCGAAA GAGTTGGCGG CTGAGGGTAA CTGGAATTGG
GATACTATGC TCGAAGCGGC ACGCAAACTG ACCGATCCGG CGAAGCAGCA GTACGGCCTC
GGGTTTGGTA ACTGGTGGGG ACCGGCTTGG GGTTACTTTG TTAACGCTGC GGGTGGTAGT
CCCTTCACGC CTGACCGTCG CGGGTGTGCG TTGAATTCAC CAGAAGCGAT CAACGGCGCC
AAGATGGTGC GGATGCTCTA CGATGAGAAG CTCCTGCCGG CCGGTGATGC GGATGGTGAG
GCACTCTTCA ATGCCGGTAA GGTAGCGATG TATTTCAATG GCCGCTGGTT TACCCCCGGT
GTCCGCACCA ATGCCCAGTT CAACTGGGAC GTGGCGGTGA TGCCGGAGGG CAAGGTGAAG
AGTACATGGC TCTTCTGGGG GCCGTATCTG GTTAATGCAA AGACCGCTAA CGCGCAGGCA
GCTTGGGAGG TGCTGAAGGT ACTGACCAGC GCCGAGGCCA CGGCTAAGGT CGCGGCGTTA
GGGACAAACA TCCCGCCACG CAGCGATCAA GAGGCGGTCA ATGCATTCCT CGCCTCGACG
CCACCGGCCA ATAATCAGGC TTTCCTTGAT GGGATCCCCT ATGCAGCACT GGAAGCACCG
GTGTGGGATG GAAGCTGGGC AGATTTCAGT GGTATTGTCC AGAGCCTCTG GGACCAGATG
ATCGCCGGAC AGATCACGCC TGAGCAATTT GGTCAGCAGG CATGTGAACA GGCGGCCAGC
ACCTTTAAGT AG
|
|---|
| Protein sequence | MMLRKHTLSW IALIALFTVM LAACGGGQPT TGSGSGGQSG SSANTGGSGQ AVTIRWRTRP
GDAAEQRVYE ELNTLVNEKL KDKGITAVYD PAPNQGYFEK LKTELAAGNA PDIFWIGGVE
LADFVNTGQI LDLKPLIDAD SSFQLSNFYP NVIEQLTRDG KIYGLPRDIS TMVVYYNEDL
FKAAGLKTPK ELAAEGNWNW DTMLEAARKL TDPAKQQYGL GFGNWWGPAW GYFVNAAGGS
PFTPDRRGCA LNSPEAINGA KMVRMLYDEK LLPAGDADGE ALFNAGKVAM YFNGRWFTPG
VRTNAQFNWD VAVMPEGKVK STWLFWGPYL VNAKTANAQA AWEVLKVLTS AEATAKVAAL
GTNIPPRSDQ EAVNAFLAST PPANNQAFLD GIPYAALEAP VWDGSWADFS GIVQSLWDQM
IAGQITPEQF GQQACEQAAS TFK
|
|---|
| |