More than 300 homologs were found in PanDaTox collection
for query gene Caci_4984 on replicon NC_013131
Organism: Catenulispora acidiphila DSM 44928



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013131  Caci_4984  extracellular solute-binding protein family 1  100 
 
 
432 aa  880    Catenulispora acidiphila DSM 44928  Bacteria  decreased coverage  0.000108283  decreased coverage  0.000897425 
 
 
-
 
NC_012850  Rleg_3430  extracellular solute-binding protein family 1  38.35 
 
 
415 aa  303  5.000000000000001e-81  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_0192  extracellular solute-binding protein family 1  38.99 
 
 
444 aa  293  3e-78  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.25123  normal 
 
 
-
 
NC_009939  Dgeo_3106  ABC transporter, substrate binding periplasmic component  33.67 
 
 
408 aa  230  4e-59  Deinococcus geothermalis DSM 11300  Bacteria  n/a    n/a   
 
 
-
 
NC_014213  Mesil_3394  ABC-type sugar transport systems permease component  31.04 
 
 
411 aa  223  4e-57  Meiothermus silvanus DSM 9946  Bacteria  normal  0.498756  normal  0.24931 
 
 
-
 
NC_013174  Jden_0513  extracellular solute-binding protein family 1  25.97 
 
 
447 aa  100  4e-20  Jonesia denitrificans DSM 20603  Bacteria  decreased coverage  0.000000038068  hitchhiker  0.000703825 
 
 
-
 
NC_013526  Tter_2504  extracellular solute-binding protein family 1  23.68 
 
 
442 aa  98.6  2e-19  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_0729  extracellular solute-binding protein family 1  24.2 
 
 
443 aa  99  2e-19  Chloroflexus aggregans DSM 9485  Bacteria  decreased coverage  0.0000254304  normal 
 
 
-
 
NC_013131  Caci_6732  extracellular solute-binding protein family 1  29.33 
 
 
425 aa  98.2  3e-19  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.255639  normal 
 
 
-
 
NC_013411  GYMC61_2731  extracellular solute-binding protein family 1  26.9 
 
 
454 aa  96.7  8e-19  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_008699  Noca_4632  extracellular solute-binding protein  27.4 
 
 
419 aa  92  2e-17  Nocardioides sp. JS614  Bacteria  normal  0.448727  n/a   
 
 
-
 
NC_011368  Rleg2_5331  extracellular solute-binding protein family 1  24.26 
 
 
424 aa  89.4  1e-16  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_012848  Rleg_5048  extracellular solute-binding protein family 1  24.7 
 
 
424 aa  87.8  3e-16  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.133709  normal 
 
 
-
 
NC_010320  Teth514_2201  extracellular solute-binding protein  23.93 
 
 
420 aa  87  5e-16  Thermoanaerobacter sp. X514  Bacteria  normal  0.455559  n/a   
 
 
-
 
NC_013595  Sros_4988  extracellular solute-binding protein  24.36 
 
 
414 aa  86.3  9e-16  Streptosporangium roseum DSM 43021  Bacteria  normal  0.601947  normal 
 
 
-
 
NC_011661  Dtur_0381  extracellular solute-binding protein family 1  28.62 
 
 
421 aa  85.1  0.000000000000002  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_013525  Tter_0183  extracellular solute-binding protein family 1  24.13 
 
 
429 aa  84.3  0.000000000000003  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_011981  Avi_7341  sugar ABC transporter sugar-binding protein  23.8 
 
 
426 aa  83.6  0.000000000000006  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_06270  ABC-type sugar transport system, periplasmic component  23.81 
 
 
426 aa  82.4  0.00000000000001  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_7695  ABC-type sugar transport system periplasmic component-like protein  26.32 
 
 
435 aa  82  0.00000000000002  Streptosporangium roseum DSM 43021  Bacteria  normal  0.397837  normal  0.53163 
 
 
-
 
NC_009939  Dgeo_2919  ABC-type sugar transport system, periplasmic component  28.03 
 
 
407 aa  82.4  0.00000000000002  Deinococcus geothermalis DSM 11300  Bacteria  n/a    n/a   
 
 
-
 
NC_013525  Tter_0829  extracellular solute-binding protein family 1  27.79 
 
 
504 aa  80.5  0.00000000000005  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_014165  Tbis_2714  extracellular solute-binding protein family 1  25.37 
 
 
414 aa  79  0.0000000000002  Thermobispora bispora DSM 43833  Bacteria  normal  0.36636  normal 
 
 
-
 
NC_011661  Dtur_0375  extracellular solute-binding protein family 1  24.44 
 
 
421 aa  78.2  0.0000000000003  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_7906  extracellular solute-binding protein family 1  27.14 
 
 
420 aa  77.8  0.0000000000003  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.819994  normal 
 
 
-
 
NC_008262  CPR_0476  ABC transporter, substrate-binding protein  20.52 
 
 
427 aa  77  0.0000000000006  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_011661  Dtur_0378  extracellular solute-binding protein family 1  23.81 
 
 
420 aa  77  0.0000000000006  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK1634  sugar ABC transporter, sugar-binding protein  22.88 
 
 
416 aa  76.6  0.0000000000007  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_009565  TBFG_12078  sugar-binding lipoprotein  24.87 
 
 
439 aa  75.9  0.000000000001  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_009565  TBFG_12341  periplasmic sugar-binding lipoprotein uspC  24.38 
 
 
440 aa  75.9  0.000000000001  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_011899  Hore_04610  extracellular solute-binding protein family 1  23.29 
 
 
431 aa  76.3  0.000000000001  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_1899  extracellular solute-binding protein, putative  22.65 
 
 
416 aa  75.1  0.000000000002  Bacillus cereus ATCC 10987  Bacteria  normal  0.41529  n/a   
 
 
-
 
NC_013172  Bfae_29010  ABC-type sugar transport system, periplasmic component  23.42 
 
 
434 aa  75.1  0.000000000002  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013205  Aaci_1215  extracellular solute-binding protein family 1  24.35 
 
 
446 aa  75.5  0.000000000002  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  decreased coverage  0.0000064062  n/a   
 
 
-
 
NC_014213  Mesil_3422  ABC-type sugar transport systems permease component  27.57 
 
 
410 aa  75.5  0.000000000002  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_011369  Rleg2_3622  extracellular solute-binding protein family 1  26.44 
 
 
412 aa  75.1  0.000000000002  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_014213  Mesil_3226  Transcriptional regulator  27.57 
 
 
410 aa  75.5  0.000000000002  Meiothermus silvanus DSM 9946  Bacteria  normal  0.101031  normal 
 
 
-
 
NC_013947  Snas_2758  extracellular solute-binding protein family 1  22.12 
 
 
423 aa  74.7  0.000000000003  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.736779  normal 
 
 
-
 
NC_013131  Caci_4993  extracellular solute-binding protein family 1  26.1 
 
 
432 aa  74.3  0.000000000004  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.0450999  normal  0.012477 
 
 
-
 
NC_008698  Tpen_1152  extracellular solute-binding protein  24.84 
 
 
393 aa  74.3  0.000000000004  Thermofilum pendens Hrk 5  Archaea  normal  0.0401617  n/a   
 
 
-
 
NC_009972  Haur_0890  extracellular solute-binding protein  25.56 
 
 
450 aa  74.3  0.000000000004  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.315589  n/a   
 
 
-
 
NC_012850  Rleg_3910  extracellular solute-binding protein family 1  25.27 
 
 
412 aa  73.9  0.000000000005  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.198843 
 
 
-
 
NC_009664  Krad_0297  extracellular solute-binding protein family 1  28.27 
 
 
453 aa  73.6  0.000000000007  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.0248346 
 
 
-
 
NC_013739  Cwoe_3957  extracellular solute-binding protein family 1  24.92 
 
 
432 aa  73.2  0.000000000008  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_009620  Smed_4159  extracellular solute-binding protein  25.84 
 
 
421 aa  72.8  0.00000000001  Sinorhizobium medicae WSM419  Bacteria  normal  0.119299  normal  0.873951 
 
 
-
 
NC_013721  HMPREF0424_1316  extracellular solute-binding protein  22.78 
 
 
423 aa  72.4  0.00000000002  Gardnerella vaginalis 409-05  Bacteria  n/a    normal 
 
 
-
 
NC_013205  Aaci_0795  extracellular solute-binding protein family 1  23.47 
 
 
460 aa  72  0.00000000002  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.215252  n/a   
 
 
-
 
NC_014210  Ndas_3999  extracellular solute-binding protein family 1  23.12 
 
 
452 aa  72.4  0.00000000002  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.220113  normal  0.250177 
 
 
-
 
NC_011831  Cagg_2267  extracellular solute-binding protein family 1  32.95 
 
 
445 aa  71.2  0.00000000003  Chloroflexus aggregans DSM 9485  Bacteria  normal  hitchhiker  0.00064551 
 
 
-
 
NC_012669  Bcav_3712  extracellular solute-binding protein family 1  23.78 
 
 
421 aa  70.9  0.00000000004  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.411366 
 
 
-
 
NC_013521  Sked_03090  ABC-type sugar transport system, periplasmic component  24.94 
 
 
419 aa  70.9  0.00000000004  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.033461  normal 
 
 
-
 
NC_009668  Oant_3895  extracellular solute-binding protein  23.4 
 
 
411 aa  70.1  0.00000000006  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_3956  ABC-type sugar transport system periplasmic component-like protein  25.23 
 
 
416 aa  70.1  0.00000000007  Streptosporangium roseum DSM 43021  Bacteria  normal  0.282171  normal  0.0187852 
 
 
-
 
NC_013411  GYMC61_1727  extracellular solute-binding protein family 1  23.25 
 
 
422 aa  70.1  0.00000000007  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_004311  BRA0748  sugar ABC transporter, periplasmic sugar-binding protein, putative  22.94 
 
 
411 aa  70.1  0.00000000008  Brucella suis 1330  Bacteria  normal  0.537127  n/a   
 
 
-
 
NC_009767  Rcas_0274  extracellular solute-binding protein  24.37 
 
 
439 aa  69.7  0.0000000001  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.285114  normal 
 
 
-
 
NC_007413  Ava_4289  extracellular solute-binding protein  23.55 
 
 
466 aa  68.6  0.0000000002  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_010483  TRQ2_0970  extracellular solute-binding protein  22.46 
 
 
411 aa  68.6  0.0000000002  Thermotoga sp. RQ2  Bacteria  hitchhiker  0.000309876  n/a   
 
 
-
 
NC_013205  Aaci_2049  extracellular solute-binding protein family 1  25.17 
 
 
438 aa  68.9  0.0000000002  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.266449  n/a   
 
 
-
 
NC_013739  Cwoe_4883  extracellular solute-binding protein family 1  24.44 
 
 
436 aa  68.6  0.0000000002  Conexibacter woesei DSM 14684  Bacteria  normal  0.504344  normal 
 
 
-
 
NC_009620  Smed_4136  extracellular solute-binding protein  24.64 
 
 
424 aa  68.9  0.0000000002  Sinorhizobium medicae WSM419  Bacteria  normal  0.518326  normal 
 
 
-
 
NC_013172  Bfae_29320  ABC-type sugar transport system, periplasmic component  25.18 
 
 
443 aa  68.2  0.0000000003  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2451  extracellular solute-binding protein family 1  21.25 
 
 
449 aa  68.2  0.0000000003  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.135643  n/a   
 
 
-
 
NC_009486  Tpet_0954  extracellular solute-binding protein  23.69 
 
 
411 aa  68.2  0.0000000003  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_1229  extracellular solute-binding protein  23.36 
 
 
461 aa  67.8  0.0000000004  Anabaena variabilis ATCC 29413  Bacteria  normal  0.0257979  normal  0.868479 
 
 
-
 
NC_009616  Tmel_1820  extracellular solute-binding protein  23.67 
 
 
411 aa  67.8  0.0000000004  Thermosipho melanesiensis BI429  Bacteria  normal  0.148067  n/a   
 
 
-
 
NC_013131  Caci_4320  extracellular solute-binding protein family 1  26.43 
 
 
425 aa  67.8  0.0000000004  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.811375  hitchhiker  0.00841489 
 
 
-
 
NC_012854  Rleg_6528  extracellular solute-binding protein family 1  25.08 
 
 
415 aa  67.4  0.0000000005  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.0147922 
 
 
-
 
NC_011769  DvMF_0656  extracellular solute-binding protein family 1  24.12 
 
 
431 aa  67  0.0000000006  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.31335 
 
 
-
 
NC_010483  TRQ2_1696  extracellular solute-binding protein  29.03 
 
 
436 aa  67  0.0000000007  Thermotoga sp. RQ2  Bacteria  hitchhiker  0.00506774  n/a   
 
 
-
 
NC_010676  Bphyt_7208  extracellular solute-binding protein family 1  27.3 
 
 
410 aa  66.6  0.0000000008  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_012034  Athe_2376  extracellular solute-binding protein family 1  23.64 
 
 
438 aa  66.2  0.000000001  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_010816  BLD_1060  MalE-type ABC sugar transport system periplasmic component  24.73 
 
 
408 aa  65.9  0.000000001  Bifidobacterium longum DJO10A  Bacteria  normal  0.065415  n/a   
 
 
-
 
NC_013205  Aaci_0075  extracellular solute-binding protein family 1  24.18 
 
 
441 aa  66.2  0.000000001  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_2845  extracellular solute-binding protein family 1  23.8 
 
 
439 aa  65.9  0.000000001  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013739  Cwoe_5802  extracellular solute-binding protein family 1  22.26 
 
 
444 aa  65.5  0.000000002  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.0809589 
 
 
-
 
NC_008010  Dgeo_2662  extracellular solute-binding protein  24.89 
 
 
433 aa  65.5  0.000000002  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.377519  n/a   
 
 
-
 
NC_011894  Mnod_6751  extracellular solute-binding protein family 1  26.25 
 
 
441 aa  65.5  0.000000002  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_5409  ABC-type sugar transport system periplasmic component-like protein  25.89 
 
 
457 aa  65.5  0.000000002  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_4693  extracellular solute-binding protein family 1  24.57 
 
 
457 aa  65.1  0.000000003  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.363745 
 
 
-
 
NC_012034  Athe_0399  extracellular solute-binding protein family 1  24.19 
 
 
408 aa  64.7  0.000000003  Anaerocellum thermophilum DSM 6725  Bacteria  unclonable  0.00000000195685  n/a   
 
 
-
 
NC_014212  Mesil_2466  extracellular solute-binding protein family 1  22.25 
 
 
415 aa  65.1  0.000000003  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.0930087 
 
 
-
 
NC_013526  Tter_2218  extracellular solute-binding protein family 1  24.24 
 
 
479 aa  64.3  0.000000004  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.00910899  n/a   
 
 
-
 
NC_013526  Tter_2513  extracellular solute-binding protein family 1  23.03 
 
 
441 aa  64.3  0.000000004  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_0592  extracellular solute-binding protein  22.68 
 
 
456 aa  64.3  0.000000004  Clostridium phytofermentans ISDg  Bacteria  decreased coverage  0.000165278  n/a   
 
 
-
 
NC_011886  Achl_0499  extracellular solute-binding protein family 1  26.87 
 
 
434 aa  63.9  0.000000005  Arthrobacter chlorophenolicus A6  Bacteria  n/a    decreased coverage  0.000057577 
 
 
-
 
NC_008146  Mmcs_4357  extracellular solute-binding protein  25.27 
 
 
455 aa  63.9  0.000000005  Mycobacterium sp. MCS  Bacteria  normal  0.200959  n/a   
 
 
-
 
NC_008705  Mkms_4443  extracellular solute-binding protein  25.27 
 
 
455 aa  63.9  0.000000005  Mycobacterium sp. KMS  Bacteria  normal  normal  0.0226595 
 
 
-
 
NC_008751  Dvul_0224  extracellular solute-binding protein  24.6 
 
 
431 aa  63.9  0.000000005  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_009436  Ent638_3856  glycerol-3-phosphate transporter periplasmic binding protein  23.58 
 
 
440 aa  63.9  0.000000005  Enterobacter sp. 638  Bacteria  normal  normal  0.64819 
 
 
-
 
NC_012917  PC1_0125  glycerol-3-phosphate transporter periplasmic binding protein  23.98 
 
 
444 aa  64.3  0.000000005  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_007644  Moth_1484  extracellular solute-binding protein  24.94 
 
 
444 aa  63.2  0.000000008  Moorella thermoacetica ATCC 39073  Bacteria  unclonable  0.00000000000980441  normal 
 
 
-
 
NC_007802  Jann_3553  extracellular solute-binding protein  23.56 
 
 
419 aa  63.2  0.000000009  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_0137  extracellular solute-binding protein family 1  23.08 
 
 
453 aa  63.2  0.000000009  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013526  Tter_2526  extracellular solute-binding protein family 1  23.44 
 
 
520 aa  62.8  0.00000001  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.0000430481  n/a   
 
 
-
 
NC_009380  Strop_0803  extracellular solute-binding protein  25 
 
 
433 aa  62.4  0.00000001  Salinispora tropica CNB-440  Bacteria  normal  0.437157  normal 
 
 
-
 
NC_009523  RoseRS_3149  extracellular solute-binding protein  21.71 
 
 
427 aa  62.4  0.00000001  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_009718  Fnod_0450  extracellular solute-binding protein  23.99 
 
 
414 aa  62.8  0.00000001  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  0.308403  n/a   
 
 
-
 
NC_007952  Bxe_B0420  ABC sugar transporter, periplasmic ligand binding protein  25.16 
 
 
410 aa  61.6  0.00000002  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010623  Bphy_4057  extracellular solute-binding protein  26.18 
 
 
410 aa  61.6  0.00000002  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
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