| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dvul_0224 |
|---|
| Symbol | |
|---|
| ID | 4662352 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio vulgaris DP4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008751 |
|---|
| Strand | - |
|---|
| Start bp | 272431 |
|---|
| End bp | 273726 |
|---|
| Gene Length | 1296 bp |
|---|
| Protein Length | 431 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 639818420 |
|---|
| Product | extracellular solute-binding protein |
|---|
| Protein accession | YP_965675 |
|---|
| Protein GI | 120601275 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCCTAT TCCGCAAAAC CTGCGCACTG GTGGCGGCTT CGCTGCTGTC GCTGACCCTG
ATGGCGGGCA CCGCGCTCGC CGAAAAGGTC AATCTCACCT TCTACTTCCC GGTCTCCGTC
GGCGGCCCCA TCACCAAGAT TGTCGAGGGC ATGACAGAGC AGTTCATGAA GGAACACCCC
GACATCAACA TCACCCCCGT CTACGCAGGC ATCTACCGCG AGACGCTCAC CAAGGCGCTC
ACGGCCCTGC GTGGCGGTGA ACCGCCCCAT GTTGCCGTGC TGCTCTCCAC CGACATGTAC
ACCCTCATCG ACGAGGATGC CATCGTCCCC TACGACAGCA TCATGAAGCC CGAAGATATG
GCCTTCACCA AGGCGTTCTT CCCCGGCTTC ATGAGCAACA GCCAGACCGG CGGCAAGACG
TGGGGCATTC CCTTCCAGCG CTCGACCATC GTCATGTACT GGAACAAGGA GGCCTTCAAG
GCTGCGGGCC TCGACCCTGA CAAGGCCCCT GCCAACTGGC AGGAACTGGT CGCCATGGGC
AAGAAGCTCA CCGTCAAGGA CGAAAGCGGC AAGGTCACCC AGTGGGGCGT CGCCATCCCG
TCCACCGGCT ATGCCTACTG GATGCTGCAG GCCCTCGCCA TCCAGAACGG CGTGGAACTC
ATGAACGCCG AAGGCACCAA GACCTACTTC GACGACCCCA AGGCCATCGA AGCCCTCACC
TTCCTCGTCG ACCTCGCCGG CAAGCACGGC GTGTCGCCCT CCGGCACCAT CGACTGGGCC
ACCACCCCGC GTGACTTCTT CGAGCGCAAG ACCGCCATCA TGTGGACCAC CACCGGCAAC
CTGACCAACG TCCGCAAGAA CGCGCAATTC CCCTTCGGTG TGGGCATGCT GCCCGCCAAC
ACCCGCCCCG GTTCGCCCAC GGGCGGCGGC AACTTCTACA TCTTCAAGAA GAGCACCCCC
GCCGAACGTC AGGCCGCCGT CACCTTCGTG AAGTGGATGA CCAGCGCCGA ACGCGCAGCC
CAGTGGGGTA TCGACACCGG CTATGTGGCG GTGCGCCCCG ATGCATGGGA GACCAAGGCC
ATGAAGGACT ACGTGGCCTC CTTCCCCTAC GCCGCCATCG CCCGCGACCA GCTGGCCCAC
GGCGTGGCCG AGCTCTCCAC CCACGACAAC CAGCGCGTGA CCAAGGCGCT TGACGACGCC
ATTCAGGCCG CCGTCACCGG TTCCAAGACA CCTGCCGAAG CACTCAAGGC AGCCCAGAAG
GAAGCCGAGC GCATCCTGCG CCGTTACGCG AAGTAG
|
|---|
| Protein sequence | MALFRKTCAL VAASLLSLTL MAGTALAEKV NLTFYFPVSV GGPITKIVEG MTEQFMKEHP
DINITPVYAG IYRETLTKAL TALRGGEPPH VAVLLSTDMY TLIDEDAIVP YDSIMKPEDM
AFTKAFFPGF MSNSQTGGKT WGIPFQRSTI VMYWNKEAFK AAGLDPDKAP ANWQELVAMG
KKLTVKDESG KVTQWGVAIP STGYAYWMLQ ALAIQNGVEL MNAEGTKTYF DDPKAIEALT
FLVDLAGKHG VSPSGTIDWA TTPRDFFERK TAIMWTTTGN LTNVRKNAQF PFGVGMLPAN
TRPGSPTGGG NFYIFKKSTP AERQAAVTFV KWMTSAERAA QWGIDTGYVA VRPDAWETKA
MKDYVASFPY AAIARDQLAH GVAELSTHDN QRVTKALDDA IQAAVTGSKT PAEALKAAQK
EAERILRRYA K
|
|---|
| |