More than 300 homologs were found in PanDaTox collection
for query gene Mnod_6751 on replicon NC_011894
Organism: Methylobacterium nodulans ORS 2060



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010511  M446_6664  extracellular solute-binding protein  86.37 
 
 
452 aa  746    Methylobacterium sp. 4-46  Bacteria  normal  normal  0.0689323 
 
 
-
 
NC_011894  Mnod_6751  extracellular solute-binding protein family 1  100 
 
 
441 aa  899    Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_3386  extracellular solute-binding protein family 1  47.93 
 
 
440 aa  408  1.0000000000000001e-112  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_3270  extracellular solute-binding protein family 1  47.82 
 
 
435 aa  404  1e-111  Dickeya dadantii Ech703  Bacteria  normal  0.543416  n/a   
 
 
-
 
NC_013421  Pecwa_0845  extracellular solute-binding protein family 1  49.42 
 
 
435 aa  385  1e-106  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_0631  extracellular solute-binding protein family 1  50.72 
 
 
435 aa  386  1e-106  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_0224  extracellular solute-binding protein  36.01 
 
 
431 aa  275  9e-73  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_5306  extracellular solute-binding protein  35.89 
 
 
431 aa  268  2e-70  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.457023 
 
 
-
 
NC_011769  DvMF_0656  extracellular solute-binding protein family 1  35.29 
 
 
431 aa  263  4.999999999999999e-69  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.31335 
 
 
-
 
NC_011992  Dtpsy_2659  extracellular solute-binding protein family 1  34.41 
 
 
431 aa  258  2e-67  Acidovorax ebreus TPSY  Bacteria  decreased coverage  0.00136924  n/a   
 
 
-
 
NC_008782  Ajs_3306  extracellular solute-binding protein  34.16 
 
 
431 aa  255  1.0000000000000001e-66  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_008043  TM1040_3216  extracellular solute-binding protein  35.56 
 
 
425 aa  253  4.0000000000000004e-66  Ruegeria sp. TM1040  Bacteria  normal  normal  0.949389 
 
 
-
 
NC_012793  GWCH70_1392  extracellular solute-binding protein family 1  33.58 
 
 
445 aa  205  1e-51  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_2846  extracellular solute-binding protein family 1  31.28 
 
 
435 aa  189  1e-46  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.687638 
 
 
-
 
NC_009832  Spro_0234  glycerol-3-phosphate transporter periplasmic binding protein  30.46 
 
 
439 aa  186  9e-46  Serratia proteamaculans 568  Bacteria  normal  normal  0.500336 
 
 
-
 
NC_012917  PC1_0125  glycerol-3-phosphate transporter periplasmic binding protein  29.71 
 
 
444 aa  184  2.0000000000000003e-45  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_013946  Mrub_0322  extracellular solute-binding protein family 1  30.94 
 
 
435 aa  181  2.9999999999999997e-44  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_010622  Bphy_2709  glycerol-3-phosphate transporter periplasmic binding protein  29.73 
 
 
441 aa  181  2.9999999999999997e-44  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_013421  Pecwa_0117  glycerol-3-phosphate transporter periplasmic binding protein  29.31 
 
 
444 aa  180  4.999999999999999e-44  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_010498  EcSMS35_3732  glycerol-3-phosphate transporter periplasmic binding protein  29.57 
 
 
438 aa  177  2e-43  Escherichia coli SMS-3-5  Bacteria  normal  normal 
 
 
-
 
NC_014212  Mesil_0955  extracellular solute-binding protein family 1  30 
 
 
437 aa  177  3e-43  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.152307 
 
 
-
 
NC_011772  BCG9842_B4733  putative glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  31.16 
 
 
458 aa  177  3e-43  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_009436  Ent638_3856  glycerol-3-phosphate transporter periplasmic binding protein  29.45 
 
 
440 aa  177  4e-43  Enterobacter sp. 638  Bacteria  normal  normal  0.64819 
 
 
-
 
NC_010465  YPK_3962  glycerol-3-phosphate transporter periplasmic binding protein  28.41 
 
 
439 aa  177  5e-43  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_007347  Reut_A2052  extracellular solute-binding protein  30.41 
 
 
438 aa  176  5e-43  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_0256  glycerol-3-phosphate transporter periplasmic binding protein  28.41 
 
 
439 aa  177  5e-43  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_010084  Bmul_0298  glycerol-3-phosphate transporter periplasmic binding protein  28.67 
 
 
444 aa  176  7e-43  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
CP001509  ECD_03302  glycerol-3-phosphate transporter subunit  29.33 
 
 
438 aa  175  9.999999999999999e-43  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_0262  extracellular solute-binding protein family 1  29.33 
 
 
438 aa  175  9.999999999999999e-43  Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
NC_011353  ECH74115_4767  glycerol-3-phosphate transporter periplasmic binding protein  29.33 
 
 
438 aa  175  9.999999999999999e-43  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal  0.552805 
 
 
-
 
NC_012892  B21_03255  hypothetical protein  29.33 
 
 
438 aa  175  9.999999999999999e-43  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A0606  putative glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  30.96 
 
 
458 aa  176  9.999999999999999e-43  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_4045  glycerol-3-phosphate transporter periplasmic binding protein  28.51 
 
 
439 aa  175  9.999999999999999e-43  Dickeya zeae Ech1591  Bacteria  normal  0.661181  n/a   
 
 
-
 
NC_010468  EcolC_0263  glycerol-3-phosphate transporter periplasmic binding protein  29.33 
 
 
438 aa  175  9.999999999999999e-43  Escherichia coli ATCC 8739  Bacteria  normal  normal 
 
 
-
 
NC_008390  Bamb_0314  glycerol-3-phosphate transporter periplasmic binding protein  28.67 
 
 
444 aa  175  9.999999999999999e-43  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_009800  EcHS_A3650  glycerol-3-phosphate transporter periplasmic binding protein  29.33 
 
 
438 aa  175  9.999999999999999e-43  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_0483  extracellular solute-binding protein  31.23 
 
 
458 aa  175  9.999999999999999e-43  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A0700  putative glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  31.49 
 
 
458 aa  175  9.999999999999999e-43  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_003295  RSc1264  glycerol-3-phosphate-binding periplasmic lipoprotein signal peptide  31.28 
 
 
438 aa  174  1.9999999999999998e-42  Ralstonia solanacearum GMI1000  Bacteria  normal  0.400828  normal  0.517414 
 
 
-
 
NC_003909  BCE_0632  glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein, putative  31.49 
 
 
458 aa  175  1.9999999999999998e-42  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_006348  BMA2744  glycerol-3-phosphate transporter periplasmic binding protein  28.21 
 
 
441 aa  175  1.9999999999999998e-42  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_010658  SbBS512_E3870  glycerol-3-phosphate transporter periplasmic binding protein  29.33 
 
 
438 aa  175  1.9999999999999998e-42  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_3726  glycerol-3-phosphate transporter periplasmic binding protein  28.21 
 
 
441 aa  175  1.9999999999999998e-42  Burkholderia pseudomallei 1710b  Bacteria  normal  0.268589  n/a   
 
 
-
 
NC_007644  Moth_1484  extracellular solute-binding protein  31.62 
 
 
444 aa  175  1.9999999999999998e-42  Moorella thermoacetica ATCC 39073  Bacteria  unclonable  0.00000000000980441  normal 
 
 
-
 
NC_007651  BTH_I3021  glycerol-3-phosphate transporter periplasmic binding protein  28.38 
 
 
441 aa  175  1.9999999999999998e-42  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_007951  Bxe_A0448  glycerol-3-phosphate transporter periplasmic binding protein  28.83 
 
 
441 aa  175  1.9999999999999998e-42  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_009801  EcE24377A_3931  glycerol-3-phosphate transporter periplasmic binding protein  29.09 
 
 
438 aa  174  1.9999999999999998e-42  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A3655  glycerol-3-phosphate transporter periplasmic binding protein  28.19 
 
 
439 aa  174  1.9999999999999998e-42  Yersinia pestis Angola  Bacteria  normal  normal 
 
 
-
 
NC_008785  BMASAVP1_A3209  glycerol-3-phosphate transporter periplasmic binding protein  28.21 
 
 
441 aa  175  1.9999999999999998e-42  Burkholderia mallei SAVP1  Bacteria  normal  0.0248662  n/a   
 
 
-
 
NC_008836  BMA10229_A1760  glycerol-3-phosphate transporter periplasmic binding protein  28.21 
 
 
441 aa  175  1.9999999999999998e-42  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_2794  glycerol-3-phosphate transporter periplasmic binding protein  28.21 
 
 
441 aa  175  1.9999999999999998e-42  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK0482  glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  31.23 
 
 
458 aa  174  2.9999999999999996e-42  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_0625  putative glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  31.23 
 
 
458 aa  174  2.9999999999999996e-42  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_010551  BamMC406_0323  glycerol-3-phosphate transporter periplasmic binding protein  28.67 
 
 
444 aa  174  2.9999999999999996e-42  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.839712 
 
 
-
 
NC_005957  BT9727_0480  glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  31.23 
 
 
458 aa  174  3.9999999999999995e-42  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_008060  Bcen_2712  glycerol-3-phosphate transporter periplasmic binding protein  27.56 
 
 
443 aa  174  3.9999999999999995e-42  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.290307  n/a   
 
 
-
 
NC_010508  Bcenmc03_0374  glycerol-3-phosphate transporter periplasmic binding protein  27.56 
 
 
444 aa  174  3.9999999999999995e-42  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_008542  Bcen2424_0395  glycerol-3-phosphate transporter periplasmic binding protein  27.56 
 
 
443 aa  174  3.9999999999999995e-42  Burkholderia cenocepacia HI2424  Bacteria  normal  0.954301  n/a   
 
 
-
 
NC_007510  Bcep18194_A3492  glycerol-3-phosphate transporter periplasmic binding protein  27.56 
 
 
444 aa  173  5e-42  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_011149  SeAg_B3759  glycerol-3-phosphate transporter periplasmic binding protein  30.2 
 
 
438 aa  172  7.999999999999999e-42  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_011083  SeHA_C3869  glycerol-3-phosphate transporter periplasmic binding protein  30.2 
 
 
438 aa  172  7.999999999999999e-42  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal 
 
 
-
 
NC_011080  SNSL254_A3826  glycerol-3-phosphate transporter periplasmic binding protein  30.2 
 
 
438 aa  172  7.999999999999999e-42  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_005945  BAS0538  glycerol-3-phosphate ABC transporter glycerol-3-phosphate-binding protein  30.98 
 
 
458 aa  172  1e-41  Bacillus anthracis str. Sterne  Bacteria  normal  0.406699  n/a   
 
 
-
 
NC_007530  GBAA_0569  glycerol-3-phosphate ABC transporter glycerol-3-phosphate-binding protein  30.98 
 
 
458 aa  172  1e-41  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011205  SeD_A3928  glycerol-3-phosphate transporter periplasmic binding protein  30.2 
 
 
438 aa  172  1e-41  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal 
 
 
-
 
NC_012880  Dd703_3861  glycerol-3-phosphate transporter periplasmic binding protein  28.29 
 
 
439 aa  171  2e-41  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_3697  glycerol-3-phosphate transporter periplasmic binding protein  27.98 
 
 
441 aa  171  2e-41  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_3755  glycerol-3-phosphate transporter periplasmic binding protein  27.98 
 
 
441 aa  171  2e-41  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_011094  SeSA_A3748  glycerol-3-phosphate transporter periplasmic binding protein  29.98 
 
 
438 aa  170  5e-41  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_010681  Bphyt_3509  glycerol-3-phosphate transporter periplasmic binding protein  28.15 
 
 
441 aa  170  5e-41  Burkholderia phytofirmans PsJN  Bacteria  normal  0.839022  normal  0.0272066 
 
 
-
 
NC_010682  Rpic_1092  extracellular solute-binding protein family 1  30.56 
 
 
438 aa  165  1.0000000000000001e-39  Ralstonia pickettii 12J  Bacteria  normal  0.0503452  normal 
 
 
-
 
NC_012856  Rpic12D_1185  extracellular solute-binding protein family 1  30.56 
 
 
438 aa  165  1.0000000000000001e-39  Ralstonia pickettii 12D  Bacteria  normal  0.276437  normal 
 
 
-
 
NC_010483  TRQ2_1696  extracellular solute-binding protein  30.64 
 
 
436 aa  162  9e-39  Thermotoga sp. RQ2  Bacteria  hitchhiker  0.00506774  n/a   
 
 
-
 
NC_011831  Cagg_2195  extracellular solute-binding protein family 1  31.67 
 
 
450 aa  161  3e-38  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_013171  Apre_0061  extracellular solute-binding protein family 1  30.51 
 
 
462 aa  159  7e-38  Anaerococcus prevotii DSM 20548  Bacteria  normal  n/a   
 
 
-
 
NC_010003  Pmob_0289  extracellular solute-binding protein  27.25 
 
 
437 aa  158  2e-37  Petrotoga mobilis SJ95  Bacteria  unclonable  0.00000019091  n/a   
 
 
-
 
NC_013411  GYMC61_2845  extracellular solute-binding protein family 1  29.93 
 
 
439 aa  157  3e-37  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009767  Rcas_0113  extracellular solute-binding protein  30.55 
 
 
455 aa  156  8e-37  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.270734  normal 
 
 
-
 
NC_013421  Pecwa_2173  extracellular solute-binding protein family 1  28.54 
 
 
445 aa  156  9e-37  Pectobacterium wasabiae WPP163  Bacteria  hitchhiker  0.00822083  n/a   
 
 
-
 
NC_010003  Pmob_0721  extracellular solute-binding protein  27.25 
 
 
437 aa  155  1e-36  Petrotoga mobilis SJ95  Bacteria  normal  0.540981  n/a   
 
 
-
 
NC_012917  PC1_1881  extracellular solute-binding protein family 1  28.31 
 
 
445 aa  153  5e-36  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  unclonable  0.000340671  n/a   
 
 
-
 
NC_009523  RoseRS_4566  extracellular solute-binding protein  28.65 
 
 
453 aa  152  8.999999999999999e-36  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_014212  Mesil_0475  extracellular solute-binding protein family 1  29.08 
 
 
397 aa  151  2e-35  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_009616  Tmel_0753  extracellular solute-binding protein  29.63 
 
 
437 aa  151  2e-35  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_013205  Aaci_0075  extracellular solute-binding protein family 1  30.35 
 
 
441 aa  151  3e-35  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_008783  BARBAKC583_0349  glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein  27.29 
 
 
441 aa  149  1.0000000000000001e-34  Bartonella bacilliformis KC583  Bacteria  normal  n/a   
 
 
-
 
NC_007973  Rmet_2055  extracellular solute-binding protein  28.12 
 
 
436 aa  147  5e-34  Cupriavidus metallidurans CH34  Bacteria  normal  0.822621  normal 
 
 
-
 
NC_014212  Mesil_0476  extracellular solute-binding protein family 1  27.6 
 
 
401 aa  144  2e-33  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_013526  Tter_2294  extracellular solute-binding protein family 1  28.32 
 
 
448 aa  144  3e-33  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_012848  Rleg_5204  extracellular solute-binding protein family 1  28.71 
 
 
440 aa  142  8e-33  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.306263 
 
 
-
 
NC_008044  TM1040_0849  extracellular solute-binding protein  26.89 
 
 
434 aa  142  9.999999999999999e-33  Ruegeria sp. TM1040  Bacteria  normal  0.0177782  normal 
 
 
-
 
NC_009720  Xaut_4449  extracellular solute-binding protein  29.83 
 
 
446 aa  141  3e-32  Xanthobacter autotrophicus Py2  Bacteria  decreased coverage  0.00843107  normal  0.115126 
 
 
-
 
NC_011886  Achl_2663  extracellular solute-binding protein family 1  32.65 
 
 
468 aa  140  4.999999999999999e-32  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_007964  Nham_3686  extracellular solute-binding protein  28.19 
 
 
460 aa  139  7e-32  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_014158  Tpau_3527  extracellular solute-binding protein family 1  29.85 
 
 
436 aa  137  3.0000000000000003e-31  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_3944  extracellular solute-binding protein  29.68 
 
 
464 aa  137  4e-31  Frankia sp. EAN1pec  Bacteria  normal  0.920276  normal  0.0416082 
 
 
-
 
NC_007925  RPC_0097  extracellular solute-binding protein  28.04 
 
 
434 aa  136  8e-31  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_008010  Dgeo_2662  extracellular solute-binding protein  27.56 
 
 
433 aa  136  9e-31  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.377519  n/a   
 
 
-
 
NC_011992  Dtpsy_0791  extracellular solute-binding protein family 1  29.25 
 
 
437 aa  135  9.999999999999999e-31  Acidovorax ebreus TPSY  Bacteria  normal  0.721808  n/a   
 
 
-
 
NC_008541  Arth_2948  extracellular solute-binding protein  32.22 
 
 
448 aa  134  1.9999999999999998e-30  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
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