More than 300 homologs were found in PanDaTox collection
for query gene Pecwa_0845 on replicon NC_013421
Organism: Pectobacterium wasabiae WPP163



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012912  Dd1591_3386  extracellular solute-binding protein family 1  74.09 
 
 
440 aa  675    Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_0845  extracellular solute-binding protein family 1  100 
 
 
435 aa  892    Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_0631  extracellular solute-binding protein family 1  97.47 
 
 
435 aa  823    Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_3270  extracellular solute-binding protein family 1  75.4 
 
 
435 aa  683    Dickeya dadantii Ech703  Bacteria  normal  0.543416  n/a   
 
 
-
 
NC_011894  Mnod_6751  extracellular solute-binding protein family 1  49.42 
 
 
441 aa  413  1e-114  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_6664  extracellular solute-binding protein  51.21 
 
 
452 aa  401  9.999999999999999e-111  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.0689323 
 
 
-
 
NC_008043  TM1040_3216  extracellular solute-binding protein  36.43 
 
 
425 aa  229  8e-59  Ruegeria sp. TM1040  Bacteria  normal  normal  0.949389 
 
 
-
 
NC_011769  DvMF_0656  extracellular solute-binding protein family 1  33.65 
 
 
431 aa  214  3.9999999999999995e-54  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.31335 
 
 
-
 
NC_010002  Daci_5306  extracellular solute-binding protein  33.89 
 
 
431 aa  211  3e-53  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.457023 
 
 
-
 
NC_008751  Dvul_0224  extracellular solute-binding protein  32.46 
 
 
431 aa  209  1e-52  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_2659  extracellular solute-binding protein family 1  32.61 
 
 
431 aa  201  3e-50  Acidovorax ebreus TPSY  Bacteria  decreased coverage  0.00136924  n/a   
 
 
-
 
NC_008782  Ajs_3306  extracellular solute-binding protein  32.85 
 
 
431 aa  200  5e-50  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_2846  extracellular solute-binding protein family 1  28.25 
 
 
435 aa  162  8.000000000000001e-39  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.687638 
 
 
-
 
NC_012793  GWCH70_1392  extracellular solute-binding protein family 1  30.51 
 
 
445 aa  160  4e-38  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_014212  Mesil_0955  extracellular solute-binding protein family 1  30.14 
 
 
437 aa  155  2e-36  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.152307 
 
 
-
 
NC_007510  Bcep18194_A3492  glycerol-3-phosphate transporter periplasmic binding protein  31.09 
 
 
444 aa  146  6e-34  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_006348  BMA2744  glycerol-3-phosphate transporter periplasmic binding protein  30.57 
 
 
441 aa  145  1e-33  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_3726  glycerol-3-phosphate transporter periplasmic binding protein  30.57 
 
 
441 aa  145  1e-33  Burkholderia pseudomallei 1710b  Bacteria  normal  0.268589  n/a   
 
 
-
 
NC_008785  BMASAVP1_A3209  glycerol-3-phosphate transporter periplasmic binding protein  30.57 
 
 
441 aa  145  1e-33  Burkholderia mallei SAVP1  Bacteria  normal  0.0248662  n/a   
 
 
-
 
NC_008836  BMA10229_A1760  glycerol-3-phosphate transporter periplasmic binding protein  30.57 
 
 
441 aa  145  1e-33  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_2794  glycerol-3-phosphate transporter periplasmic binding protein  30.57 
 
 
441 aa  145  1e-33  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_3697  glycerol-3-phosphate transporter periplasmic binding protein  30.31 
 
 
441 aa  145  2e-33  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_013946  Mrub_0322  extracellular solute-binding protein family 1  28.64 
 
 
435 aa  144  4e-33  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_013411  GYMC61_2845  extracellular solute-binding protein family 1  28.22 
 
 
439 aa  144  4e-33  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013205  Aaci_0075  extracellular solute-binding protein family 1  26.85 
 
 
441 aa  143  5e-33  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B4733  putative glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  29.86 
 
 
458 aa  143  6e-33  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_007651  BTH_I3021  glycerol-3-phosphate transporter periplasmic binding protein  30.31 
 
 
441 aa  142  9e-33  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_012848  Rleg_5204  extracellular solute-binding protein family 1  30.1 
 
 
440 aa  142  9.999999999999999e-33  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.306263 
 
 
-
 
NC_008390  Bamb_0314  glycerol-3-phosphate transporter periplasmic binding protein  29.74 
 
 
444 aa  142  9.999999999999999e-33  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A0606  putative glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  29.58 
 
 
458 aa  141  1.9999999999999998e-32  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_3755  glycerol-3-phosphate transporter periplasmic binding protein  30.31 
 
 
441 aa  142  1.9999999999999998e-32  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_008060  Bcen_2712  glycerol-3-phosphate transporter periplasmic binding protein  30.13 
 
 
443 aa  141  3e-32  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.290307  n/a   
 
 
-
 
NC_008542  Bcen2424_0395  glycerol-3-phosphate transporter periplasmic binding protein  30.13 
 
 
443 aa  141  3e-32  Burkholderia cenocepacia HI2424  Bacteria  normal  0.954301  n/a   
 
 
-
 
NC_010551  BamMC406_0323  glycerol-3-phosphate transporter periplasmic binding protein  29.49 
 
 
444 aa  141  3e-32  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.839712 
 
 
-
 
NC_011773  BCAH820_0625  putative glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  29.3 
 
 
458 aa  140  4.999999999999999e-32  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_005945  BAS0538  glycerol-3-phosphate ABC transporter glycerol-3-phosphate-binding protein  29.3 
 
 
458 aa  140  6e-32  Bacillus anthracis str. Sterne  Bacteria  normal  0.406699  n/a   
 
 
-
 
NC_007530  GBAA_0569  glycerol-3-phosphate ABC transporter glycerol-3-phosphate-binding protein  29.3 
 
 
458 aa  140  6e-32  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2294  extracellular solute-binding protein family 1  27.35 
 
 
448 aa  140  6e-32  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_0480  glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  29.3 
 
 
458 aa  139  7e-32  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK0482  glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  29.3 
 
 
458 aa  140  7e-32  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_010084  Bmul_0298  glycerol-3-phosphate transporter periplasmic binding protein  30.05 
 
 
444 aa  139  7.999999999999999e-32  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_010508  Bcenmc03_0374  glycerol-3-phosphate transporter periplasmic binding protein  30.05 
 
 
444 aa  139  8.999999999999999e-32  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_2195  extracellular solute-binding protein family 1  28.65 
 
 
450 aa  139  1e-31  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_010184  BcerKBAB4_0483  extracellular solute-binding protein  29.01 
 
 
458 aa  139  1e-31  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_0632  glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein, putative  29.75 
 
 
458 aa  138  2e-31  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_009784  VIBHAR_06396  ABC-type sugar transport system periplasmic protein  28.43 
 
 
435 aa  137  5e-31  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013946  Mrub_2730  extracellular solute-binding protein family 1  27.01 
 
 
399 aa  135  9.999999999999999e-31  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_011658  BCAH187_A0700  putative glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  29.01 
 
 
458 aa  135  9.999999999999999e-31  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A3655  glycerol-3-phosphate transporter periplasmic binding protein  27.94 
 
 
439 aa  134  1.9999999999999998e-30  Yersinia pestis Angola  Bacteria  normal  normal 
 
 
-
 
NC_010681  Bphyt_3509  glycerol-3-phosphate transporter periplasmic binding protein  27.98 
 
 
441 aa  134  3e-30  Burkholderia phytofirmans PsJN  Bacteria  normal  0.839022  normal  0.0272066 
 
 
-
 
NC_010465  YPK_3962  glycerol-3-phosphate transporter periplasmic binding protein  27.94 
 
 
439 aa  134  3e-30  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_0256  glycerol-3-phosphate transporter periplasmic binding protein  27.94 
 
 
439 aa  134  3e-30  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_009832  Spro_0234  glycerol-3-phosphate transporter periplasmic binding protein  28.09 
 
 
439 aa  134  3.9999999999999996e-30  Serratia proteamaculans 568  Bacteria  normal  normal  0.500336 
 
 
-
 
NC_008709  Ping_2093  glycerol-3-phosphate ABC transporter extracellular solute-binding family 1 protein  27.13 
 
 
435 aa  134  3.9999999999999996e-30  Psychromonas ingrahamii 37  Bacteria  normal  0.107678  normal  0.487826 
 
 
-
 
NC_013171  Apre_0061  extracellular solute-binding protein family 1  28.33 
 
 
462 aa  134  3.9999999999999996e-30  Anaerococcus prevotii DSM 20548  Bacteria  normal  n/a   
 
 
-
 
NC_007951  Bxe_A0448  glycerol-3-phosphate transporter periplasmic binding protein  27.69 
 
 
441 aa  133  5e-30  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_013421  Pecwa_2173  extracellular solute-binding protein family 1  26.3 
 
 
445 aa  132  1.0000000000000001e-29  Pectobacterium wasabiae WPP163  Bacteria  hitchhiker  0.00822083  n/a   
 
 
-
 
NC_012917  PC1_0125  glycerol-3-phosphate transporter periplasmic binding protein  29.27 
 
 
444 aa  132  1.0000000000000001e-29  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_009616  Tmel_0270  extracellular solute-binding protein  27.67 
 
 
419 aa  132  1.0000000000000001e-29  Thermosipho melanesiensis BI429  Bacteria  normal  0.562219  n/a   
 
 
-
 
NC_013421  Pecwa_0117  glycerol-3-phosphate transporter periplasmic binding protein  29.2 
 
 
444 aa  130  3e-29  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_1881  extracellular solute-binding protein family 1  26.3 
 
 
445 aa  131  3e-29  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  unclonable  0.000340671  n/a   
 
 
-
 
NC_009767  Rcas_0113  extracellular solute-binding protein  27.3 
 
 
455 aa  130  7.000000000000001e-29  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.270734  normal 
 
 
-
 
NC_007413  Ava_1229  extracellular solute-binding protein  26.46 
 
 
461 aa  128  2.0000000000000002e-28  Anabaena variabilis ATCC 29413  Bacteria  normal  0.0257979  normal  0.868479 
 
 
-
 
NC_009436  Ent638_3856  glycerol-3-phosphate transporter periplasmic binding protein  28.75 
 
 
440 aa  128  2.0000000000000002e-28  Enterobacter sp. 638  Bacteria  normal  normal  0.64819 
 
 
-
 
NC_014212  Mesil_0476  extracellular solute-binding protein family 1  27.34 
 
 
401 aa  128  2.0000000000000002e-28  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_011083  SeHA_C3869  glycerol-3-phosphate transporter periplasmic binding protein  28.01 
 
 
438 aa  127  3e-28  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal 
 
 
-
 
NC_011080  SNSL254_A3826  glycerol-3-phosphate transporter periplasmic binding protein  28.01 
 
 
438 aa  127  3e-28  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_011149  SeAg_B3759  glycerol-3-phosphate transporter periplasmic binding protein  28.01 
 
 
438 aa  127  3e-28  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_009718  Fnod_0188  extracellular solute-binding protein  27.92 
 
 
420 aa  125  1e-27  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_011205  SeD_A3928  glycerol-3-phosphate transporter periplasmic binding protein  27.75 
 
 
438 aa  125  1e-27  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal 
 
 
-
 
NC_010622  Bphy_2709  glycerol-3-phosphate transporter periplasmic binding protein  27.06 
 
 
441 aa  125  2e-27  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_011884  Cyan7425_3276  extracellular solute-binding protein family 1  25.42 
 
 
420 aa  124  3e-27  Cyanothece sp. PCC 7425  Bacteria  normal  0.147153  normal  0.336546 
 
 
-
 
NC_012912  Dd1591_4045  glycerol-3-phosphate transporter periplasmic binding protein  27.65 
 
 
439 aa  124  3e-27  Dickeya zeae Ech1591  Bacteria  normal  0.661181  n/a   
 
 
-
 
NC_011094  SeSA_A3748  glycerol-3-phosphate transporter periplasmic binding protein  28.01 
 
 
438 aa  124  3e-27  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_012880  Dd703_3861  glycerol-3-phosphate transporter periplasmic binding protein  27.93 
 
 
439 aa  124  3e-27  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_0604  extracellular solute-binding protein  25.93 
 
 
433 aa  124  3e-27  Marinomonas sp. MWYL1  Bacteria  normal  hitchhiker  0.00010036 
 
 
-
 
NC_014158  Tpau_3527  extracellular solute-binding protein family 1  27.98 
 
 
436 aa  123  8e-27  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_4566  extracellular solute-binding protein  26.18 
 
 
453 aa  122  9.999999999999999e-27  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_007973  Rmet_2055  extracellular solute-binding protein  26.94 
 
 
436 aa  121  1.9999999999999998e-26  Cupriavidus metallidurans CH34  Bacteria  normal  0.822621  normal 
 
 
-
 
NC_009486  Tpet_0322  extracellular solute-binding protein  26.44 
 
 
419 aa  122  1.9999999999999998e-26  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_1508  extracellular solute-binding protein family 1  24.28 
 
 
451 aa  122  1.9999999999999998e-26  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.55774  normal 
 
 
-
 
NC_010483  TRQ2_0340  extracellular solute-binding protein  27.06 
 
 
419 aa  121  3e-26  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_014212  Mesil_0475  extracellular solute-binding protein family 1  26.54 
 
 
397 aa  120  3.9999999999999996e-26  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_010498  EcSMS35_3732  glycerol-3-phosphate transporter periplasmic binding protein  28.45 
 
 
438 aa  120  6e-26  Escherichia coli SMS-3-5  Bacteria  normal  normal 
 
 
-
 
NC_007347  Reut_A2052  extracellular solute-binding protein  26.29 
 
 
438 aa  120  7e-26  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
CP001509  ECD_03302  glycerol-3-phosphate transporter subunit  28.31 
 
 
438 aa  119  7.999999999999999e-26  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_0262  extracellular solute-binding protein family 1  28.31 
 
 
438 aa  119  7.999999999999999e-26  Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
NC_011353  ECH74115_4767  glycerol-3-phosphate transporter periplasmic binding protein  28.31 
 
 
438 aa  119  7.999999999999999e-26  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal  0.552805 
 
 
-
 
NC_009800  EcHS_A3650  glycerol-3-phosphate transporter periplasmic binding protein  28.31 
 
 
438 aa  119  7.999999999999999e-26  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_012892  B21_03255  hypothetical protein  28.31 
 
 
438 aa  119  7.999999999999999e-26  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_010658  SbBS512_E3870  glycerol-3-phosphate transporter periplasmic binding protein  28.31 
 
 
438 aa  119  7.999999999999999e-26  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_010468  EcolC_0263  glycerol-3-phosphate transporter periplasmic binding protein  28.31 
 
 
438 aa  119  7.999999999999999e-26  Escherichia coli ATCC 8739  Bacteria  normal  normal 
 
 
-
 
NC_008783  BARBAKC583_0349  glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein  26 
 
 
441 aa  119  9.999999999999999e-26  Bartonella bacilliformis KC583  Bacteria  normal  n/a   
 
 
-
 
NC_007644  Moth_1484  extracellular solute-binding protein  28.65 
 
 
444 aa  119  1.9999999999999998e-25  Moorella thermoacetica ATCC 39073  Bacteria  unclonable  0.00000000000980441  normal 
 
 
-
 
NC_008010  Dgeo_2662  extracellular solute-binding protein  25.11 
 
 
433 aa  118  1.9999999999999998e-25  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.377519  n/a   
 
 
-
 
NC_009801  EcE24377A_3931  glycerol-3-phosphate transporter periplasmic binding protein  28.04 
 
 
438 aa  118  1.9999999999999998e-25  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_007963  Csal_2738  extracellular solute-binding protein  25.39 
 
 
438 aa  117  3.9999999999999997e-25  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.345118  n/a   
 
 
-
 
NC_010483  TRQ2_1696  extracellular solute-binding protein  26.61 
 
 
436 aa  117  5e-25  Thermotoga sp. RQ2  Bacteria  hitchhiker  0.00506774  n/a   
 
 
-
 
NC_007964  Nham_3686  extracellular solute-binding protein  27.47 
 
 
460 aa  116  6e-25  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_013205  Aaci_2049  extracellular solute-binding protein family 1  25.55 
 
 
438 aa  117  6e-25  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.266449  n/a   
 
 
-
 
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