Gene Dd703_3270 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_3270 
Symbol 
ID8089216 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp3830190 
End bp3831497 
Gene Length1308 bp 
Protein Length435 aa 
Translation table11 
GC content56% 
IMG OID644837342 
Productextracellular solute-binding protein family 1 
Protein accessionYP_002988854 
Protein GI242240673 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1653] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.543416 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAAGT TCAAGGCGTT GACGCTCGGC GTCACGCTCG CCTTCACGGG CACGGCGTTG 
GCAAAGCAAA ACATTGATTT CATGTTCCCA GCGCCGGTGG ACGGCAAGCT GACCATGGAA
ATGACCCGCG TTATCAAAGA ATTCAACAAC TCACAACAGG ATGTGGAAGT TCGCGGTATC
TTCACCGGCA ACTACGACAC CACCAAAATG AAGGCCGAAG CCGCTCAAAA GGCTGGCCAA
CCGCCCGCTT TGGTGATCAT GTCCGCTAAC TTCACCACCG ATCTGGCGTT GAAAAACGAA
ATTCTGCCGA TGGATGAGTT GTTTAAGTAC GGCAGCGAAA AAGCAGGGCC GTTCCTGATG
AACGAGTTCT GGCCCGCCAT GCACCAGAAT GCACAGGTGA TGGGCGTCAC CTACGCGATT
CCATTCCACA ACTCGACGCC AATCCTGTAT TACAACAAGA CAATGTTCGA TCAGGCGGGG
ATCAAGCAAG CGCCGCAAAC CTGGCAGGAA CTACTCGCCG ATGCCAAAAA ACTGACTGAT
CAGAGCAAAG GCCAGTGGGG CATCATGTTG CCGTCCACCA ACGACGACTA CGGCGGTTGG
ATCCTCTCGG CGCTGGTACG CGCTAATGGC GGGAATTACT TCAACAGTAG CTATCCGGGC
GAAGTCTATT ACAACGTTCC GACCACCATC GGTGCGCTGC GCTTCTGGCA GAATTTGGTC
TACAAGGACA AAGTCATGCC GTCCGGCGTG CTGGATTCCA AACAGATCAG CGCTACGTTT
TTCTCGGGCA AACTGGGGAT GGCGATGCTA AGCACGGGCG CACTGGGCTT TATGCGCGAA
AACACCAAAG ATTTCGAACT CGGCGTGGCC ATGCTGCCGG CCAAAGAGCA GCGCGCGGTA
CCGATTGGCG GCGCCAGCCT GGTCAGCTTC AAGGGGATTT CCGAAGAGCA GAAGAAGGCG
GCCTATCAGT TCCTGACTTA TCTGGTCAGC CCGCAGGTCA ACGGCAGTTG GAGCCGCTTC
ACCGGCTATT TCTCACCACG AAAAGCCGCT TACGATACGC CGGAAATGAA GTCCTATCTG
GAGAAAGATC CGCGTGCGAC CATCGCGCTG CAACAGCTCA AGTACGCGCA TCCGTGGTAC
TCCACCTATG AAACGGTAGC GGTGCGCAAG GCGATGGAAA ATCAGTTAGC CGCCCTCGTG
AACGACGAAA AGGTTACGCC GGAAGCCGCT GCCCAAACGG CGCAACAGGA AGCCGATACC
ATCATGAAGC CGTATACCGA CCAGACGGCG TTGGCCCCGG TGAAATAA
 
Protein sequence
MSKFKALTLG VTLAFTGTAL AKQNIDFMFP APVDGKLTME MTRVIKEFNN SQQDVEVRGI 
FTGNYDTTKM KAEAAQKAGQ PPALVIMSAN FTTDLALKNE ILPMDELFKY GSEKAGPFLM
NEFWPAMHQN AQVMGVTYAI PFHNSTPILY YNKTMFDQAG IKQAPQTWQE LLADAKKLTD
QSKGQWGIML PSTNDDYGGW ILSALVRANG GNYFNSSYPG EVYYNVPTTI GALRFWQNLV
YKDKVMPSGV LDSKQISATF FSGKLGMAML STGALGFMRE NTKDFELGVA MLPAKEQRAV
PIGGASLVSF KGISEEQKKA AYQFLTYLVS PQVNGSWSRF TGYFSPRKAA YDTPEMKSYL
EKDPRATIAL QQLKYAHPWY STYETVAVRK AMENQLAALV NDEKVTPEAA AQTAQQEADT
IMKPYTDQTA LAPVK