| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A3928 |
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| Symbol | ugpB |
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| ID | 6871559 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | - |
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| Start bp | 3766139 |
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| End bp | 3767455 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 642786887 |
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| Product | glycerol-3-phosphate transporter periplasmic binding protein |
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| Protein accession | YP_002217515 |
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| Protein GI | 198244402 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 69 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATATCGT TACGACATAC AGCTTTAGGA CTGGCGCTGA GTCTGGCATT TACGGGTCAG
GCGTTGGCCG TCACCACTAT TCCATTCTGG CATTCAATGG AAGGGGAGTT AGGCAAAGAA
GTTGATTCAC TGGCGCAACG TTTCAACCAG GCCAATCCGG ATTACAAAAT CGTTCCGGTC
TATAAGGGGA ACTATGAACA GAACCTGAGC GCCGGGATCG CGGCATTCCG TACCGGCAAC
GCGCCGGCAA TATTGCAGGT TTATGAGGTT GGGACGGCGA CCATGATGGC CTCGAAAGCC
ATTAAGCCGG TTTATGAAGT GTTTAAAGAC GCCGGTATTA ACTTTGACGA GTCCCAGTTT
GTACCAACCG TTGCAGGCTA CTACACCGAT GCTAAAAGCG GGCATCTGCT CTCCCAGCCC
TTTAACAGCT CCACGCCGGT ACTGTACTAC AACAAAGACG CCTTTAAGAA CGCCGGTTTA
GATCCGGAAC AGCCGCCGAA AACCTGGCAG GAGCTGGCTG ACTATACCGC GAAACTGAGA
GCGGCAGGCA TGAAATGCGG TTACGCCAGC GGCTGGCAAG GTTGGATCCA ACTGGAAAAC
TTCAGCGCCT GGAACGGTCT CCCCTTCGCC AGTAAAAACA ATGGTTTTGA CGGTACAGAT
GCGGTGCTGG AGTTTAATAA GCCAGAGCAG GTGAAACATA TCGCACTACT GGAAGAGATG
AATAAAAAAG GCGATTTTAG CTATGTTGGG CGTAAGGACG AGTCTACCGA GAAGTTTTAT
AACGGTGACT GCGCGATGAC AACCGCGTCC TCCGGCTCGC TCGCCAATAT CCGCCAGTAT
GCCAAATTTA ACTATGGCGT GGGTATGATG CCGTACGACG CTGATATCAA GGGCGCGCCG
CAAAACGCCA TTATCGGCGG AGCCAGCCTA TGGGTCATGC AGGGTAAAGA TAAAGAAACC
TATACCGGCG TCGCCAAATT CCTCGACTTC CTGGCAAAAC CGGAAAACGC TGCTGAATGG
CATCAAAAAA CCGGCTACCT GCCGATTACC ACCGCCGCCT ACGAGCTGAC CCGCGAGCAG
GGTTATTACG ATAAAAACCC CGGTGCGGAT ATCGCCACTC GCCAGATGTT GAATAAGCCG
CCGTTACCCT TCACCAAAGG CTTGCGTCTG GGCAATATGC CGCAGATTCG TACCATCGTG
GACGAAGAGC TGGAAAGTGT CTGGACCGGG AAGAAAACCC CACAACAGGC GTTGGATACC
GCAGTGGATC GCGGGAATCA GTTGCTGCGT CGTTTTGAGA AAGCAAGCAA ATCTTAA
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| Protein sequence | MISLRHTALG LALSLAFTGQ ALAVTTIPFW HSMEGELGKE VDSLAQRFNQ ANPDYKIVPV
YKGNYEQNLS AGIAAFRTGN APAILQVYEV GTATMMASKA IKPVYEVFKD AGINFDESQF
VPTVAGYYTD AKSGHLLSQP FNSSTPVLYY NKDAFKNAGL DPEQPPKTWQ ELADYTAKLR
AAGMKCGYAS GWQGWIQLEN FSAWNGLPFA SKNNGFDGTD AVLEFNKPEQ VKHIALLEEM
NKKGDFSYVG RKDESTEKFY NGDCAMTTAS SGSLANIRQY AKFNYGVGMM PYDADIKGAP
QNAIIGGASL WVMQGKDKET YTGVAKFLDF LAKPENAAEW HQKTGYLPIT TAAYELTREQ
GYYDKNPGAD IATRQMLNKP PLPFTKGLRL GNMPQIRTIV DEELESVWTG KKTPQQALDT
AVDRGNQLLR RFEKASKS
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