Gene Dgeo_2662 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDgeo_2662 
Symbol 
ID4073893 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDeinococcus geothermalis DSM 11300 
KingdomBacteria 
Replicon accessionNC_008010 
Strand
Start bp374844 
End bp376145 
Gene Length1302 bp 
Protein Length433 aa 
Translation table11 
GC content60% 
IMG OID641228814 
Productextracellular solute-binding protein 
Protein accessionYP_594169 
Protein GI94972129 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1653] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.377519 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGACGA TACTGTCCAT GAAAGCCATT CTGCTGACGC TGGCTCTGGC AGGCACAGCC 
ACAGCCCAAA CCACTGTGGA GTTTTGGCAT TCCTTCGGAG ACGCCAAGCG CGCGGGCTGG
ATTCAGGCGC GGGCCGACGA GTTCAACAAG GCCCATCCCG GCCTCAAGGT GGTGCCCAGC
TACAAGGGGA GCTACAACGA CAGCCTCCAG GCCACCATTC TGGCCGCGCG TCAGGGCAAG
CCGCCTGCGC TGGTGCAGAT TTTTGAGGTA GGGAGCCAAC TCGCTCTCGA CAGCGGGGCC
TTTCAGCCGG TGAGCAGCGT CAAGACCGTG GATTTCAGTG ATTACATCAA GCCGGTCATC
AACTACTACA CCATTGGTGG CAAGGTCAAC AGCCTGCCCT TCAATTCGTC CTCGCCGGTG
CTGTATTACA ACCAGGACCT GATGAAAAAG GCCGGCCTAG ATCCCAAGCG GCCACCCACC
ACCTTTGGCG GTCTGCTCAA AGCTTGCCAG AAGATCCAAG CAGCCGGTCT GGACGCCAAA
TGCTTTGGCA TGAGCCTCAA CGGCTGGTTC GTGGAACAGT GGATGGCCGA GCAGGGCGCA
ACGTTGCTCA ATAACAGCAA CGGGCGTCAA GGCCGCGCGA CAAGCACCAA CCTCGAGAGC
GCCGCTGCAC GGAACATCTT TGCCTTCTTC AAGGCCTTGC GCGACAACGG TTACTATACC
TACTCCGGGA AACTGGAAGA CTGGGACGGC TCAGACGCCA TCTTCACCAA CCAGAAGACG
GTTTTTCATA TCACCTCGAC CGCCGACATC GGCAATATCC GCGACGCCGC AAAAAAGGCG
GGCTTCACGG TTGGCGTGGG CGTGCTGCCC ATTCCAGACG GCACCAAGCG CAATGGCGTG
GTGATTGGCG GAGCGTCCCT GTGGATCCCA AAGGGCATCA GCAAAGAACA GGCTGAGGGC
GCGCTGGATT TTGCGCTGTA TATGACCAAC ACCAAGAACA TGGCCGACTG GCACAAGCTC
ACTGGCTACT ATCCGGTGCG CCAGAGCAGC ATCAACCTGC TGCGCCAGCA GGGCTGGTTT
ACCCAGACGC CGCTGCAGCT CGTCGCCTTT AACCAGCTCA CCCAGACGGT ACCCAGCCCG
GCGACTGCCG GAAGTCTCAA CGGCGCGGCG ATCCAGACCC GCAAGATCAT CGAAGAGGGC
CTCCAGAAGG TGCTGAACGG CACGCCGGTA GACGCTGCCC TGCGCGAGAC CAAGGCCCGT
GCCGACGCCG CCCTGAGTGA CTACAACGCC AACTTCAAGT AA
 
Protein sequence
MLTILSMKAI LLTLALAGTA TAQTTVEFWH SFGDAKRAGW IQARADEFNK AHPGLKVVPS 
YKGSYNDSLQ ATILAARQGK PPALVQIFEV GSQLALDSGA FQPVSSVKTV DFSDYIKPVI
NYYTIGGKVN SLPFNSSSPV LYYNQDLMKK AGLDPKRPPT TFGGLLKACQ KIQAAGLDAK
CFGMSLNGWF VEQWMAEQGA TLLNNSNGRQ GRATSTNLES AAARNIFAFF KALRDNGYYT
YSGKLEDWDG SDAIFTNQKT VFHITSTADI GNIRDAAKKA GFTVGVGVLP IPDGTKRNGV
VIGGASLWIP KGISKEQAEG ALDFALYMTN TKNMADWHKL TGYYPVRQSS INLLRQQGWF
TQTPLQLVAF NQLTQTVPSP ATAGSLNGAA IQTRKIIEEG LQKVLNGTPV DAALRETKAR
ADAALSDYNA NFK