| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E3870 |
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| Symbol | ugpB |
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| ID | 6272716 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | + |
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| Start bp | 3595071 |
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| End bp | 3596387 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641727726 |
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| Product | glycerol-3-phosphate transporter periplasmic binding protein |
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| Protein accession | YP_001882161 |
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| Protein GI | 187731002 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 51 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACCGT TACATTATAC AGCTTCAGCA CTGGCGCTCG GACTGGCGTT AATGGGGAAT
GCACAGGCAG TGACGACCAT TCCGTTCTGG CATTCTATGG AAGGGGAACT GGGTAAAGAG
GTGGATTCTC TGGCCCAACG TTTTAACGCC GAAAATCCGG ATTACAAAAT TGTACCGACC
TATAAAGGCA ACTACGAACA GAATTTAAGC GCGGGGATTG CCGCATTTCG TACCGGCAAC
GCTCCGGCTA TTTTGCAGGT TTATGAAGTT GGCACCGCCA CCATGATGGC ATCGAAAGCC
ATTAAACCGG TATATGACGT GTTTAAAGAG GCGGGGATTC AATTCGATGA GTCGCAGTTT
GTGCCGACGG TTTCCGGTTA CTACTCCGAC AGCAAAACGG GCCACTTACT CTCCCAGCCA
TTCAACAGCT CGACTCCCGT TCTCTATTAC AACAAAGACG CCTTCAAGAA AGCGGGGTTA
GACCCGGAAC AGCCGCCGAA AACCTGGCAG GATCTGGCGA ACTATGCCGC GAAACTGAAA
GCCTCCGGCA TGAAGTGCGG CTACGCCAGC GGCTGGCAGG GCTGGATCCA ACTGGAAAAC
TTTAGCGCTT GGAACGGTCT GCCGTTTGCC AGCAAAAACA ACGGCTTTGA CGGCACAGAT
GCGGTGCTGG AGTTCAACAA GCCGGAGCAG GTGAAACACA TCGCCATGCT CGAGGAGATG
AACAAGAAGG GCGACTTCAG CTACGTCGGT CGTAAGGATG AATCCACCGA GAAGTTCTAT
AACGGTGATT GCGCGATGAC CACCGCCTCT TCCGGTTCTC TTGCCAACAT TCGCGAGTAC
GCCAAATTTA ACTACGGCGT AGGCATGATG CCTTACGACG GCGATGCGAA AGATGCGCCA
CAAAACGCCA TTATCGGCGG AGCCAGCCTG TGGGTGATGC AGGGTAAAGA TAAAGAAACG
TATACCGGTG TGGCGAAGTT CCTCGATTTC CTCGCGAAGC CAGAAAACGC TGCCGAGTGG
CATCAGAAAA CCGGTTATCT GCCAATCACC AAAGCAGCGT ATGACCTGAC CCGTGAGCAG
GGCTTTTATG AGAAAAACCC AGGGGCGGAT ACCGCGACGC GTCAGATGCT GAATAAGCCG
CCGTTGCCGT TCACCAAAGG GCTGCGTCTG GGCAACATGC CGCAGATCCG CGTGATTGTG
GATGAAGAGC TGGAGAGCGT GTGGACCGGT AAGAAGACAC CACAGCAGGC ACTGGATACC
GCCGTTGAGC GTGGGAACCA GTTACTGCGC CGCTTTGAGA AATCGACGAA GTCTTAA
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| Protein sequence | MKPLHYTASA LALGLALMGN AQAVTTIPFW HSMEGELGKE VDSLAQRFNA ENPDYKIVPT
YKGNYEQNLS AGIAAFRTGN APAILQVYEV GTATMMASKA IKPVYDVFKE AGIQFDESQF
VPTVSGYYSD SKTGHLLSQP FNSSTPVLYY NKDAFKKAGL DPEQPPKTWQ DLANYAAKLK
ASGMKCGYAS GWQGWIQLEN FSAWNGLPFA SKNNGFDGTD AVLEFNKPEQ VKHIAMLEEM
NKKGDFSYVG RKDESTEKFY NGDCAMTTAS SGSLANIREY AKFNYGVGMM PYDGDAKDAP
QNAIIGGASL WVMQGKDKET YTGVAKFLDF LAKPENAAEW HQKTGYLPIT KAAYDLTREQ
GFYEKNPGAD TATRQMLNKP PLPFTKGLRL GNMPQIRVIV DEELESVWTG KKTPQQALDT
AVERGNQLLR RFEKSTKS
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