Gene SbBS512_E3870 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E3870 
SymbolugpB 
ID6272716 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp3595071 
End bp3596387 
Gene Length1317 bp 
Protein Length438 aa 
Translation table11 
GC content53% 
IMG OID641727726 
Productglycerol-3-phosphate transporter periplasmic binding protein 
Protein accessionYP_001882161 
Protein GI187731002 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1653] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones51 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACCGT TACATTATAC AGCTTCAGCA CTGGCGCTCG GACTGGCGTT AATGGGGAAT 
GCACAGGCAG TGACGACCAT TCCGTTCTGG CATTCTATGG AAGGGGAACT GGGTAAAGAG
GTGGATTCTC TGGCCCAACG TTTTAACGCC GAAAATCCGG ATTACAAAAT TGTACCGACC
TATAAAGGCA ACTACGAACA GAATTTAAGC GCGGGGATTG CCGCATTTCG TACCGGCAAC
GCTCCGGCTA TTTTGCAGGT TTATGAAGTT GGCACCGCCA CCATGATGGC ATCGAAAGCC
ATTAAACCGG TATATGACGT GTTTAAAGAG GCGGGGATTC AATTCGATGA GTCGCAGTTT
GTGCCGACGG TTTCCGGTTA CTACTCCGAC AGCAAAACGG GCCACTTACT CTCCCAGCCA
TTCAACAGCT CGACTCCCGT TCTCTATTAC AACAAAGACG CCTTCAAGAA AGCGGGGTTA
GACCCGGAAC AGCCGCCGAA AACCTGGCAG GATCTGGCGA ACTATGCCGC GAAACTGAAA
GCCTCCGGCA TGAAGTGCGG CTACGCCAGC GGCTGGCAGG GCTGGATCCA ACTGGAAAAC
TTTAGCGCTT GGAACGGTCT GCCGTTTGCC AGCAAAAACA ACGGCTTTGA CGGCACAGAT
GCGGTGCTGG AGTTCAACAA GCCGGAGCAG GTGAAACACA TCGCCATGCT CGAGGAGATG
AACAAGAAGG GCGACTTCAG CTACGTCGGT CGTAAGGATG AATCCACCGA GAAGTTCTAT
AACGGTGATT GCGCGATGAC CACCGCCTCT TCCGGTTCTC TTGCCAACAT TCGCGAGTAC
GCCAAATTTA ACTACGGCGT AGGCATGATG CCTTACGACG GCGATGCGAA AGATGCGCCA
CAAAACGCCA TTATCGGCGG AGCCAGCCTG TGGGTGATGC AGGGTAAAGA TAAAGAAACG
TATACCGGTG TGGCGAAGTT CCTCGATTTC CTCGCGAAGC CAGAAAACGC TGCCGAGTGG
CATCAGAAAA CCGGTTATCT GCCAATCACC AAAGCAGCGT ATGACCTGAC CCGTGAGCAG
GGCTTTTATG AGAAAAACCC AGGGGCGGAT ACCGCGACGC GTCAGATGCT GAATAAGCCG
CCGTTGCCGT TCACCAAAGG GCTGCGTCTG GGCAACATGC CGCAGATCCG CGTGATTGTG
GATGAAGAGC TGGAGAGCGT GTGGACCGGT AAGAAGACAC CACAGCAGGC ACTGGATACC
GCCGTTGAGC GTGGGAACCA GTTACTGCGC CGCTTTGAGA AATCGACGAA GTCTTAA
 
Protein sequence
MKPLHYTASA LALGLALMGN AQAVTTIPFW HSMEGELGKE VDSLAQRFNA ENPDYKIVPT 
YKGNYEQNLS AGIAAFRTGN APAILQVYEV GTATMMASKA IKPVYDVFKE AGIQFDESQF
VPTVSGYYSD SKTGHLLSQP FNSSTPVLYY NKDAFKKAGL DPEQPPKTWQ DLANYAAKLK
ASGMKCGYAS GWQGWIQLEN FSAWNGLPFA SKNNGFDGTD AVLEFNKPEQ VKHIAMLEEM
NKKGDFSYVG RKDESTEKFY NGDCAMTTAS SGSLANIREY AKFNYGVGMM PYDGDAKDAP
QNAIIGGASL WVMQGKDKET YTGVAKFLDF LAKPENAAEW HQKTGYLPIT KAAYDLTREQ
GFYEKNPGAD TATRQMLNKP PLPFTKGLRL GNMPQIRVIV DEELESVWTG KKTPQQALDT
AVERGNQLLR RFEKSTKS