| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_3944 |
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| Symbol | |
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| ID | 5672305 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 4713651 |
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| End bp | 4715045 |
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| Gene Length | 1395 bp |
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| Protein Length | 464 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641242823 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001508240 |
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| Protein GI | 158315732 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.920276 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0416082 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAACGAC GGCGCTTTGC CCGGGGCGTG GCGGCCGCCT GCGCTGCCGC GCTCGCCCTC
ACCCTCGCCG CCTGCGGATC CGACGACGGC GCCGACGCGG GCGGGACGTC CACCGCCGGG
GTCGTGCCCG AGCTCGGGCC GGACCAGAAG GTCTCGATTG TCTTCGAGAG CTACAACCTC
GCCCAGCCCG GCCCGTGGAC GGACACCTTC AACGGCCTGA TCGCCGACTT CGAGAAGGCC
CACCCGAACA TCTCGGTCAC CGCGCAGAAG CCGCAGACCT CCACTCTGAA GGGCTACGGC
TCGGCGGCCA CCGCGAGCAT CCAGGCCCAG ATCGCCACCG GCAACGCCCC CGACGTCGCC
CAGCTCACCT TCGGCGACCT CGGCTACACC GCGACCGCGC TCGGCGCGAA GCCGCTCGAC
GACATCGTCG GGCGCGACGC CGTCCAGGAG AACTTCGCCG GCACCCACCC GTTCGCGCCG
ACGGCGCGCA CCCTCGGAGA TGTCGACGGC AAGACCTACG GCATGCCGTT CGTCTTCTCC
ACCCCGGTGC TGTACTACAA CGCCGACCTG TTCACCCAGG CCGGCCTCGA CCCGGAGAAG
CCGCCCACGA CCTGGGACGA GTTCAAGACC GCCGCGCTGG CCATCAAGGC GAAGACCGGC
AAGAATGGCG GTTACATCGA CTGCCTCACC AAGGTCTCCG GCGACTGGTG CTACCAGGCG
CTGGTCGCCT CCAACGGCGG CTCGGTGATC TCCGAGGACC GCACCAAGCT CACCTTCGCC
GAGGCGCCCG CGGTGCAGGC GGTCGAGATG GCGCAGGACC TGGTCAACTC CGGCGCCAGC
CCGAAGCTGT CACAGGACCA GGCCTACCCG GCGTTCGCCC GCGGTGAGAT CGGCATGATC
GTCGAGACCA GTGCGGCGCA GGGCACCTTC ATCAAGGGCG CCGGCGGCGC CAAGCCGCCG
TGGACGCTGC GCGCCACCGT CATGCCGAGC TTCACCGGCA AGCCGGTCGT GCCGACGAAC
TCCGGGGCGG CGCTGTTCAT GTTCGCCAAG GACGCGGCGA AGCAGCGGGC CGCCTGGGAG
CTGATCACCT ACCTGACCAG CGACGCGGCC TACACGCAGA TCACCAGCAA GATCGGCTAC
CTGCCGCTGC GCACCGGGCT GCTCGACGAC CCGAACGGCC TGAAGACCTG GGCCGAGCAG
AACCCGCTGG TCAAGCCGAA CGTCGACCAG CTCGCGAAGC TGAAGCCGTG GGTGTCCTTC
CCGGGCAACA ACTACGTCCA GATCCGCACC GGGATGCTCG AGGCGGTCGA GAGCGTCGTC
TACAGCGGCG CCGACCCGCA GAAGACGCTC ACCGACGCCC AGAACCAGGC CGCGAAGCTG
CTGCCCCGGT CCTGA
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| Protein sequence | MKRRRFARGV AAACAAALAL TLAACGSDDG ADAGGTSTAG VVPELGPDQK VSIVFESYNL
AQPGPWTDTF NGLIADFEKA HPNISVTAQK PQTSTLKGYG SAATASIQAQ IATGNAPDVA
QLTFGDLGYT ATALGAKPLD DIVGRDAVQE NFAGTHPFAP TARTLGDVDG KTYGMPFVFS
TPVLYYNADL FTQAGLDPEK PPTTWDEFKT AALAIKAKTG KNGGYIDCLT KVSGDWCYQA
LVASNGGSVI SEDRTKLTFA EAPAVQAVEM AQDLVNSGAS PKLSQDQAYP AFARGEIGMI
VETSAAQGTF IKGAGGAKPP WTLRATVMPS FTGKPVVPTN SGAALFMFAK DAAKQRAAWE
LITYLTSDAA YTQITSKIGY LPLRTGLLDD PNGLKTWAEQ NPLVKPNVDQ LAKLKPWVSF
PGNNYVQIRT GMLEAVESVV YSGADPQKTL TDAQNQAAKL LPRS
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