| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0125 |
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| Symbol | |
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| ID | 8131025 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 150833 |
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| End bp | 152167 |
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| Gene Length | 1335 bp |
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| Protein Length | 444 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644863395 |
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| Product | glycerol-3-phosphate transporter periplasmic binding protein |
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| Protein accession | YP_003015723 |
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| Protein GI | 253686533 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCAACA ACACAACTCG TAAAACACAT GCTATTCGCA CCGCCGCGGC GTGTGTGGCA
TTAGCGCTGA TGAGCGCTAG TGCGCAGGCC GCGACAGAAA TTCCTTTCTG GCACTCTATG
GAAGGCGAGC TAGGGAAAGA AGTGAATTCT CTGGCTGACC GTTTTAACAA AGCACACAGC
GATGTAAAAA TTGTGCCGGT CTACAAAGGC AACTACGAGC AGAATCTGGC TGCCGGGATT
GCGGCCTACC GCGCTGGGAA TGCGCCCGCC ATTTTGCAGG TCTATGAAGT CGGCACGGCC
ACCATGATGG CAAGTAAAGC CATCAAACCT GTCTATGAAG TCTTCAAAGA GTCAGGCATT
AATTTCGATG AGTCGGTGTT TGTGCCGACT GTCTCTGGTT ATTACACCGA TGCGAAGAGC
GGCCACCTGC TGTCGCAGCC GTTTAACAGC TCTACTCCGG TGTTGTACTA CAACAAAGAT
GCCTTCAAAA AGGCCGGTTT AGATCCTGAG CAGCCGCCGA AAACCTGGCA GCAAATGGCT
GAGTACACCG CCAAACTGCG TGCAGCCGGG ATGAAGTGTG GCTATGCCAG CGGCTGGCAG
GGCTGGATTC AGATTGAAAA CTTCAGCGCC TGGCACGGCC TGCCAGTTGC GAGCAAAAAT
AACGGCTTTG ACGGCACCGA TGCCGTACTG GAATTCAACA AGCCGACGCA GGTTAAGCAC
ATTCAGCTGT TGCAGGACAT GAACAAGAAG GGTGACTTCA CCTATTTCGG GCGCAAGGAT
GAGCCGACCG AGAAATTCTA CAATGGCGAC TGCGCCATCA CGACCGCTTC TTCTGGTTCT
CTGGCGAACA TCCGGGAACA CGCCAAGTTC AACTACGGCG TTGGCATGAT GCCGTATGAC
GCTGATGCGA AAGGCGCACC GCAGAACGCC ATTATCGGCG GAGCCAGCCT GTGGGTGATG
GGCGGTAAAG ATGCTGCGAC CTACAAAGGC GTGGCTGAAT TTATGAAGTT CCTGGCCGAG
CCGGAAAATG CTGCTGAATG GCATCAGAAA ACCGGTTACC TGCCAATTAC TACTGCGGCG
TACGAGTTGA CGCAGAAGCA GGGCTTCTAC GAGAAAAACC CCGGTGCGGA TATCGCCACG
CGTCAGATGC TGAACAAGCC ACCGTTGCCG TTCACCAAAG GCCTGCGTTT GGGCAACATG
CCGCAAATTC GTACCGTTGT GGATGAAGAA TTAGAAAGCG TATGGACAGG TAAGAAGACG
CCTCAACAGG CGTTGGATAG CGCAGTTGAA CGCGGTAACG CGCTGCTGCG TCGCTTTGAG
CAATCGACGA AGTAA
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| Protein sequence | MFNNTTRKTH AIRTAAACVA LALMSASAQA ATEIPFWHSM EGELGKEVNS LADRFNKAHS
DVKIVPVYKG NYEQNLAAGI AAYRAGNAPA ILQVYEVGTA TMMASKAIKP VYEVFKESGI
NFDESVFVPT VSGYYTDAKS GHLLSQPFNS STPVLYYNKD AFKKAGLDPE QPPKTWQQMA
EYTAKLRAAG MKCGYASGWQ GWIQIENFSA WHGLPVASKN NGFDGTDAVL EFNKPTQVKH
IQLLQDMNKK GDFTYFGRKD EPTEKFYNGD CAITTASSGS LANIREHAKF NYGVGMMPYD
ADAKGAPQNA IIGGASLWVM GGKDAATYKG VAEFMKFLAE PENAAEWHQK TGYLPITTAA
YELTQKQGFY EKNPGADIAT RQMLNKPPLP FTKGLRLGNM PQIRTVVDEE LESVWTGKKT
PQQALDSAVE RGNALLRRFE QSTK
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