Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_3962 |
Symbol | |
ID | 6087947 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | - |
Start bp | 4370998 |
End bp | 4372317 |
Gene Length | 1320 bp |
Protein Length | 439 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641599056 |
Product | glycerol-3-phosphate transporter periplasmic binding protein |
Protein accession | YP_001722678 |
Protein GI | 170026173 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTTAATA ATTCCATTCA TAAAGTGTCG ATCTGTATCG CGCTAACACT TACGTTTAGT GCCAATGCGA TGGCAGTGAC TGAAATTCCT TTTTGGCATT CGATGGAAGG AGAATTAGGT AAAGAAGTCG ATTCAATTGC GGATCGTTTT AACCAGTCGC AGCCCGATTA TAAAATTGTT CCTGTTTATA AAGGTAATTA CGAGCAGAGT TTGGCCGCAG GTATTGCGGC ATTCCGTTCA GGTAAGGCAC CGGCTATTTT ACAAGTCTAT GAAGTCGGTA CTGCCACCAT GATGGCCAGT AAGGCGATCA AACCGGTTTA CCAAGTCTTC AAAGATGCCA ATATTGATTT TGATGAGTCC GTCTTCGTTC CAACAGTGGC AGGCTATTAC ACTGATTCTA AAACTGGGCG TTTATTGTCT CAGCCGTTTA ACAGCTCGAC CCCCGTGCTG TATTACAACA AAGAGGCTTT CAAAAAAGCG GGCTTGGACC CAGAACAACC GCCAAAAACA TGGCAAGAAC TGGCAGCAGA TACCGCTAAG CTACGCGCTG CGGGTTCTAG TTGCGGTTAT GCCAGCGGTT GGCAAGGGTG GATTCAAATT GAGAACTTCA GTGCCTGGCA TGGTCAGCCG ATAGCCAGCC GCAACAATGG TTTTGACGGC ACTGATGCGG TATTGGAATT CAATAAACCC TTGCAGGTCA AACATATCCA ATTGCTGTCG GATATGAATA AAAAAGGTGA TTTCACCTAT TTTGGCCGTA AAGATGAATC TACGTCCAAG TTCTATAACG GTGATTGCGC TATTACCACC GCCTCTTCTG GCTCCCTCGC CAGTATCCGC CATTATGCCA AGTTTAATTT CGGTGTTGGC ATGATGCCGT ATGACGCAGA TGCAAAAAAT GCGCCGCAAA ACGCCATTAT TGGTGGTGCT AGCCTGTGGG TGATGGATGG CAAAGATAAA GAGACTTACA AGGGTGTCGC AGAGTTCTTG CAATATTTGG TCAAACCAGA GATTGCCGCT GAATGGCATC AGAAGACGGG TTATCTGCCC ATCACGACGG CGGCATATGA ACTAACGAAA CAACAAGGTT TTTATGAGCA GAACCCAGGC GCTGATGTAG CGACCCGCCA GATGCTGAAT AAACCGCCAT TGCCTTATAC CAAAGGCCTG CGTCTCGGCA ATATGCCGCA GATCCGTACC GTGGTTGATG AAGAGCTGGA AGCTGTATGG ACCGGTAAGA AGACGCCTCA GGCGGCATTG GATAACTCTG TGAAGCGGGG TGATGTGTTA CTGCGTCGTT TTGAACAAGC CAATAAATAA
|
Protein sequence | MFNNSIHKVS ICIALTLTFS ANAMAVTEIP FWHSMEGELG KEVDSIADRF NQSQPDYKIV PVYKGNYEQS LAAGIAAFRS GKAPAILQVY EVGTATMMAS KAIKPVYQVF KDANIDFDES VFVPTVAGYY TDSKTGRLLS QPFNSSTPVL YYNKEAFKKA GLDPEQPPKT WQELAADTAK LRAAGSSCGY ASGWQGWIQI ENFSAWHGQP IASRNNGFDG TDAVLEFNKP LQVKHIQLLS DMNKKGDFTY FGRKDESTSK FYNGDCAITT ASSGSLASIR HYAKFNFGVG MMPYDADAKN APQNAIIGGA SLWVMDGKDK ETYKGVAEFL QYLVKPEIAA EWHQKTGYLP ITTAAYELTK QQGFYEQNPG ADVATRQMLN KPPLPYTKGL RLGNMPQIRT VVDEELEAVW TGKKTPQAAL DNSVKRGDVL LRRFEQANK
|
| |