Gene EcE24377A_3931 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcE24377A_3931 
SymbolugpB 
ID5590311 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli E24377A 
KingdomBacteria 
Replicon accessionNC_009801 
Strand
Start bp3908064 
End bp3909380 
Gene Length1317 bp 
Protein Length438 aa 
Translation table11 
GC content54% 
IMG OID640927553 
Productglycerol-3-phosphate transporter periplasmic binding protein 
Protein accessionYP_001464914 
Protein GI157157052 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1653] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACCGT TACATTATAC AGCTTCAGCA CTGGCGCTCG GACTGGCGTT AATGGGGAAT 
GCACAGGCAG TGACGACCAT TCCGTTCTGG CATTCTATGG AAGGGGAACT GGGTAAAGAG
GTGGATTCTC TGGCCCAACG TTTTAACGCC GAAAACCCGG ATTACAAAAT TGTACCGACC
TATAAAGGCA ACTACGAACA GAATTTAAGC GCGGGGATTG CCGCATTTCG TACCGGCAAC
GCACCGGCTA TTTTGCAGGT TTATGAAGTT GGCACCGCCA CCATGATGGC GTCGAAAGCC
ATTAAACCGG TGTATGACGT GTTTAAAGAG GCGGGGATTC AATTCGATGA GTCGCAGTTT
GTGCCGACGG TTTCCGGTTA CTACTCCGAC AGCAAAACGG GCCACTTACT CTCCCAGCCA
TTCAACAGCT CGACTCCCGT TCTCTATTAC AACAAAGACG CCTTCAAGAA AGCGGGGTTA
GACCCGGAAC AGCCGCCGAA AACCTGGCAG GATCTGGCGG ACTATTCCGC AAAACTGAAA
GCCTCCGGTA TGAAGTGCGG CTACGCCAGC GGCTGGCAGG GCTGGATCCA ACTGGAAAAC
TTTAGCGCCT GGAACGGTCT GCCGTTTGCC AGCAAAAACA ACGGCTTTGA CGGCACGGAC
GCGGTGCTGG AGTTCAACAA GCCGGAGCAG GTGAAACACA TCGCCATGCT CGAAGAGATG
AACAAGAAGG GCGATTTCAG CTACGTCGGG CGTAAGGATG AATCCACCGA GAAGTTCTAT
AACGGTGATT GCGCGATGAC CACCGCCTCT TCCGGTTCTC TTGCCAACAT TCGCGAGTAC
GCCAAATTCA ACTACGGCGT AGGCATGATG CCTTACGACG CCGATGCGAA AGATGCGCCA
CAAAACGCCA TTATCGGCGG AGCCAGCCTG TGGGTGATGC AGGGTAAAGA TAAAGAAACG
TATACCGGTG TGGCGAAGTT CCTCGATTTC CTCGCGAAGC CAGAAAACGC TGCTGAGTGG
CATCAGAAAA CCGGTTATCT GCCAATTACC AAAGCGGCGT ATGACCTGAC CCGTGAGCAG
GGCTTTTATG AGAAAAACCC AGGGGCGGAT ACCGCGACAC GTCAGATGCT GAACAAGCCG
CCGTTGCCGT TCACCAAAGG GCTGCGTCTG GGCAACATGC CGCAGATCCG CGTGATTGTG
GATGAAGAGC TGGAGAGCGT GTGGACCGGT AAGAAGACAC CGCAGCAGGC ACTGGATACC
GCCGTTGAGC GTGGGAACCA GTTACTGCGC CGCTTTGAGA AATCGACGAA GTCTTAA
 
Protein sequence
MKPLHYTASA LALGLALMGN AQAVTTIPFW HSMEGELGKE VDSLAQRFNA ENPDYKIVPT 
YKGNYEQNLS AGIAAFRTGN APAILQVYEV GTATMMASKA IKPVYDVFKE AGIQFDESQF
VPTVSGYYSD SKTGHLLSQP FNSSTPVLYY NKDAFKKAGL DPEQPPKTWQ DLADYSAKLK
ASGMKCGYAS GWQGWIQLEN FSAWNGLPFA SKNNGFDGTD AVLEFNKPEQ VKHIAMLEEM
NKKGDFSYVG RKDESTEKFY NGDCAMTTAS SGSLANIREY AKFNYGVGMM PYDADAKDAP
QNAIIGGASL WVMQGKDKET YTGVAKFLDF LAKPENAAEW HQKTGYLPIT KAAYDLTREQ
GFYEKNPGAD TATRQMLNKP PLPFTKGLRL GNMPQIRVIV DEELESVWTG KKTPQQALDT
AVERGNQLLR RFEKSTKS